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SCNpilot_expt_500_bf_scaffold_15254_3

Organism: SCNPILOT_CONT_500_P_Rhizobiales_62_14

partial RP 39 / 55 MC: 1 BSCG 38 / 51 MC: 3 ASCG 8 / 38
Location: comp(1729..2310)

Top 3 Functional Annotations

Value Algorithm Source
Extracellular solute-binding protein family 1 n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1M7Q9_METRJ similarity UNIREF
DB: UNIREF100
  • Identity: 76.7
  • Coverage: 193.0
  • Bit_score: 305
  • Evalue 3.60e-80
  • rbh
Bradyrhizobium elkanii strain UASWS1015 Contig169, whole genome shotgun sequence {ECO:0000313|EMBL:KIU50668.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.2
  • Coverage: 193.0
  • Bit_score: 365
  • Evalue 4.10e-98
extracellular solute-binding protein; K02055 putative spermidine/putrescine transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 76.7
  • Coverage: 193.0
  • Bit_score: 305
  • Evalue 1.10e-80
  • rbh

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Taxonomy

Bradyrhizobium elkanii → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 582
GATCTGTGGAGCCCGGAGCTGAAGGGCAAGATCGCTTCGCCCGATTTCGATCCCAGCCACATCATCGCCGTTGCCGCGCTGCTGTCAGGGGCGGACGCTGCGCACTGGGAAAAGGGACAAGAGAAGCTCAAGGCGCTGAAGCCAAATTTCAAGGCGTTCTACACCAACGATGCGAACAGCCAGCAACTGCTTGCAAGCGGTGAGACGCCGGTGCAGGTCGTTCTTTCTATGAATGCTTATTACATGATGGGGCAGGGCATCCCGCTTACGCTTGCCATGCCGAAGGAGGGAGCGGTGCTGGGCATCGACACCGTCGCCGTCATGAAGGGATCGAAGAAAGTCGATCTCGCTCATAAGTTCATCAACGTGCTTTATGATCCGGTGGTACAGGCCGAGATCGCCAAGCAGAAGAAGGGGAGCCCCGCCGTCCTCAATGCGAAGCTCGACCCCGAGATCGCGAAATTGCCGGGCGTCTTTACTTCGGCCGAACAGTGGAAGCAGCAGATCAATATCGATGCGAAGCTGCGCGCCGCAAAGACGGCGGAATGGCGTAAATGGTTTGCTGAAAACATCATGAACTGA
PROTEIN sequence
Length: 194
DLWSPELKGKIASPDFDPSHIIAVAALLSGADAAHWEKGQEKLKALKPNFKAFYTNDANSQQLLASGETPVQVVLSMNAYYMMGQGIPLTLAMPKEGAVLGIDTVAVMKGSKKVDLAHKFINVLYDPVVQAEIAKQKKGSPAVLNAKLDPEIAKLPGVFTSAEQWKQQINIDAKLRAAKTAEWRKWFAENIMN*