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SCNpilot_expt_500_bf_scaffold_18727_1

Organism: SCNPILOT_CONT_500_P_Rhizobiales_62_14

partial RP 39 / 55 MC: 1 BSCG 38 / 51 MC: 3 ASCG 8 / 38
Location: comp(2..406)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Afipia birgiae RepID=UPI000319660E similarity UNIREF
DB: UNIREF100
  • Identity: 83.0
  • Coverage: 135.0
  • Bit_score: 223
  • Evalue 9.50e-56
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 85.2
  • Coverage: 135.0
  • Bit_score: 223
  • Evalue 5.10e-56
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABD87772.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.2
  • Coverage: 135.0
  • Bit_score: 223
  • Evalue 2.30e-55

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 405
ATGGATCGCTTCGATGCCATGCAGGCCTTCGTCACCGTGGCCGACCTCAAGGGTTTCGCCCCCGCGGCGCGCAAGCTGGGACTGTCGGCCTCCGCCGTCACCCGGCTGGTGGCGGCGCTGGAAGAGCATGTCGGCGCGCGCCTGCTGCAACGAACCACGCGCTCGGTGACGCTGACCGACGTCGGCGTGCGCTTTCTCGAGCGCGCGCGGCGAATCCTCGCCGATCTCGAGGAGGCCGAAGGCTCGGCGCAGGCGGAGAGGACGCAACCGACCGGCCGCCTCGTCGTCTCGGCGCCGTTCGGGTTCGGGCGGCTCCATGTCAGTCCGTTGATGACCGCTTATCTGAAGCGCTATCCGGAGGTCACCGGCGAACTGCGACTGTCGGATCGCATGATCAATCTCGTC
PROTEIN sequence
Length: 135
MDRFDAMQAFVTVADLKGFAPAARKLGLSASAVTRLVAALEEHVGARLLQRTTRSVTLTDVGVRFLERARRILADLEEAEGSAQAERTQPTGRLVVSAPFGFGRLHVSPLMTAYLKRYPEVTGELRLSDRMINLV