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SCNpilot_expt_500_bf_scaffold_5264_7

Organism: SCNPILOT_EXPT_300_BF_Alicycliphilus_69_12

partial RP 20 / 55 MC: 2 BSCG 25 / 51 MC: 2 ASCG 9 / 38
Location: comp(5529..5882)

Top 3 Functional Annotations

Value Algorithm Source
tRNA 2-thiocytidine biosynthesis protein TtcA n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TX92_ALIDB similarity UNIREF
DB: UNIREF100
  • Identity: 97.4
  • Coverage: 117.0
  • Bit_score: 245
  • Evalue 3.50e-62
tRNA 2-thiocytidine biosynthesis protein TtcA; K14058 tRNA 2-thiocytidine biosynthesis protein TtcA similarity KEGG
DB: KEGG
  • Identity: 97.4
  • Coverage: 117.0
  • Bit_score: 245
  • Evalue 1.10e-62
tRNA 2-thiocytidine biosynthesis protein TtcA {ECO:0000256|HAMAP-Rule:MF_01850}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.4
  • Coverage: 117.0
  • Bit_score: 245
  • Evalue 4.90e-62

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Taxonomy

Alicycliphilus denitrificans → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 354
GTGGTGATCCGCCCCCTGTGCTACGTGCCCGAGAAGGACACGGCGCGCTGGGCGCAGTACCAGCAGTTCCCCATCATCCCCTGCAACCTGTGCGGCAGCCAGGAAGGCCTGCAGCGCGTGGTGGTCAATGAAATGCTGCGCGAGTGGGACAGGAAATTCCCCGGCCGCATCGAGAGCATGCTGCGCGCCATGGGCCACGTCGTCACCACGCACCTGATGGACCCGAAGCTGCACGACTTCAGGAACGCCAAGGCCACGGGCATCGCCGACCCCGATGGCGACACCGCGTTCGACCACGAGGAGTTCCCGGCCGCGCCCGGCCTGCCGGGCATGCAGGTGGTGCAGATCGGCTGA
PROTEIN sequence
Length: 118
VVIRPLCYVPEKDTARWAQYQQFPIIPCNLCGSQEGLQRVVVNEMLREWDRKFPGRIESMLRAMGHVVTTHLMDPKLHDFRNAKATGIADPDGDTAFDHEEFPAAPGLPGMQVVQIG*