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SCNpilot_expt_500_bf_scaffold_11883_3

Organism: SCNPILOT_EXPT_300_BF_Alicycliphilus_69_12

partial RP 20 / 55 MC: 2 BSCG 25 / 51 MC: 2 ASCG 9 / 38
Location: comp(1214..1714)

Top 3 Functional Annotations

Value Algorithm Source
prepilin-type cleavage/methylation; K08084 type IV fimbrial biogenesis protein FimT id=12553916 bin=BDI species=Comamonas testosteroni genus=Comamonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 68.9
  • Coverage: 167.0
  • Bit_score: 243
  • Evalue 1.10e-61
prepilin-type cleavage/methylation; K08084 type IV fimbrial biogenesis protein FimT similarity KEGG
DB: KEGG
  • Identity: 54.8
  • Coverage: 166.0
  • Bit_score: 188
  • Evalue 1.30e-45
General secretion pathway protein H {ECO:0000313|EMBL:KGG93396.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.5
  • Coverage: 167.0
  • Bit_score: 188
  • Evalue 5.90e-45

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Taxonomy

Comamonas testosteroni → Comamonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 501
ATGGTGACCGTGGCCATCCTGGCGGTCCTCGCCGCGCTTGCGGCGCCCAGCTTCACCTCCATCATCGAACGCTGGCGCGTGCAGCAGGCGGTCGAAAGCATGACGTCCACCCTGGATTACGCGCGCTCCGAGGCCGTCAAGCGCGGCGGGCGCATCGGCATACAGAAAATCGCGCAGGACACGGATGGCTGCAAGCTGGCAAGCACCAACGAAGAATGGGGCTGTGGCTGGTTCGTGTTCGTGGACAGCGACGACGACGGCAAGTGGAAGTCCGGCGAAGAGATTCTTCAAACCCTCGCCACGCCCGCCAACACCAACGTCATCCACAAATCCGGCGGCACCAACATCAAGGTCGATCGCTACGGAATGACGAGCGGACTGAACGCCAAGGGCTTCATTTTCTCGCCTGAGCCCGCCGGCATCTCATCCTCGGCCACCCGCGGCATCTGCATGGGCGCAGGGGGCCGCATCCGAGTCATCAAGGAAGTTCCATGCCAATGA
PROTEIN sequence
Length: 167
MVTVAILAVLAALAAPSFTSIIERWRVQQAVESMTSTLDYARSEAVKRGGRIGIQKIAQDTDGCKLASTNEEWGCGWFVFVDSDDDGKWKSGEEILQTLATPANTNVIHKSGGTNIKVDRYGMTSGLNAKGFIFSPEPAGISSSATRGICMGAGGRIRVIKEVPCQ*