ggKbase home page

SCNpilot_expt_500_bf_scaffold_14467_5

Organism: SCNPILOT_EXPT_300_BF_Alicycliphilus_69_12

partial RP 20 / 55 MC: 2 BSCG 25 / 51 MC: 2 ASCG 9 / 38
Location: comp(2926..3945)

Top 3 Functional Annotations

Value Algorithm Source
Lactate dehydrogenase {ECO:0000313|EMBL:KES22201.1}; EC=1.1.2.3 {ECO:0000313|EMBL:KES22201.1};; TaxID=1502784 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. AAC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.5
  • Coverage: 325.0
  • Bit_score: 514
  • Evalue 1.60e-142
L-lactate dehydrogenase (cytochrome) (EC:1.1.2.3); K00101 L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3] similarity KEGG
DB: KEGG
  • Identity: 64.0
  • Coverage: 331.0
  • Bit_score: 439
  • Evalue 8.70e-121
L-lactate dehydrogenase n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1HMS6_PSEUO similarity UNIREF
DB: UNIREF100
  • Identity: 76.6
  • Coverage: 325.0
  • Bit_score: 509
  • Evalue 2.20e-141

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas sp. AAC → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1020
GTCGACATCGACGGGCGCAGCACCGCCAGCACCCTGCTGGGCCAGCGCGTGGCCATGCCGGTGGCGCTGGCCCCGGTGGGCGCGCTGGGCATGCAGCACCCGGCGGGCGAGATCCTGGCCGCGCGCGCGGCCAAGTCCTTCGGCGTGCCCTTCGTCCTCTCGACCATGAGCATCTGCGGCCTGGAGGACGTGGCGCGCGAGGCCGGCGAAGGCTTCTGGTTCCAGCTCTACGTGATGCGCGACCGCGCCTTCGCCCGGCAATTGATCGCGCGCGCCCAGGCCGTGAACTGCCCGGTGCTGGTGCTCACGCTGGACCTGTCGCTGGTGGGCCAGCGCCACAAGGACATCAGGAACGGCCTGACCGACCCCTCGCGCCTGACGCTCAGGCAGCTGATGCAGATCGCGCGCCGCCCGCGCTGGGCGCTGGGCCAGGCCCGCAGCCCCTACAAGGGCTTCGGCAACGTGCTGGGCCACGCGCAGGGCATCAAGACCATGGCAGACATGGCGCGCTGGAAGGGCGGCGAGCTCGATCCCTCGCTCGACTGGGCCGACGTGGCCGAGATCCGCAGGCTCTGGAAGGGCCGGCTGGTGCTCAAGGGCATCCAGGACGCGGAGGACGCCCGGCTCGCGGTGCTGGTGGGCGCCGACGCCATCGTGGTCAGCAACCACGGCGGGCGCCAGCTCGATGGCGCCGAGGCCAGCATCCGCGCGCTGCCCGCCATCGTGGACGCGGTGGGCAAGAAGGCCGAGGTCTGGATGGACGGCGGCATCCGCAGCGGCCAGGACGTTCTGCGCGCCCGCGCGCTGGGCGCGCGCGGCTGCCTGATCGGCCGCGCCTACGTCTACGGCCTGGGCGCGCTGGGCCAGGCCGGCGTGGCGCAGGCCCTGCGCGTCATCCGCAACGAACTCGACCTGACCATGGCCTTCTGCGGCCGCACCGACATCGAGGCGGTGGACCGCTCCATCCTGCTGCCGGGCGGCCATCCCGGCGTAACCGAGACGAGGCGAACACCATCATGA
PROTEIN sequence
Length: 340
VDIDGRSTASTLLGQRVAMPVALAPVGALGMQHPAGEILAARAAKSFGVPFVLSTMSICGLEDVAREAGEGFWFQLYVMRDRAFARQLIARAQAVNCPVLVLTLDLSLVGQRHKDIRNGLTDPSRLTLRQLMQIARRPRWALGQARSPYKGFGNVLGHAQGIKTMADMARWKGGELDPSLDWADVAEIRRLWKGRLVLKGIQDAEDARLAVLVGADAIVVSNHGGRQLDGAEASIRALPAIVDAVGKKAEVWMDGGIRSGQDVLRARALGARGCLIGRAYVYGLGALGQAGVAQALRVIRNELDLTMAFCGRTDIEAVDRSILLPGGHPGVTETRRTPS*