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SCNpilot_expt_500_bf_scaffold_33097_1

Organism: SCNPILOT_EXPT_300_BF_Alicycliphilus_69_12

partial RP 20 / 55 MC: 2 BSCG 25 / 51 MC: 2 ASCG 9 / 38
Location: 433..945

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0F234_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 76.3
  • Coverage: 169.0
  • Bit_score: 262
  • Evalue 3.10e-67
RNA polymerase sigma factor FecI {ECO:0000313|EMBL:KGD90202.1}; TaxID=1532557 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp. RTa.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.5
  • Coverage: 169.0
  • Bit_score: 265
  • Evalue 3.90e-68
RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 65.1
  • Coverage: 169.0
  • Bit_score: 222
  • Evalue 1.40e-55

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Taxonomy

Achromobacter sp. RTa → Achromobacter → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 513
ATGCCTGCTCCGGACCTTTCACTTGCTGATGATGTCACCAGCCTGTATGTCGAGCACAGCACTTGGCTTCAGGGTTGGTTGCGCAGGCGCATCGGCGATACGTTCACGGCGGCTGATGTAGCTCAGGATACCTTCCTCAGCCTGCTGGACGGAAAACCCGCGACGCAGGAGATTCGTGAGCCGCGACCGTTTCTTGCAACTATCGCCAATCGGCTGCTGGCACACCGTTTTCGTCGACAGTTGCTCGAAACCGCCTATCTGGAAGCCCTAGTGGGCCTGCCTGAAGAATTTGCCCCATCGCCGGAGACGCGGCTGATTGCGCTCCAAAGTCTGCAGGAGATCGACCGAGTTCTCGATGGGCTGCCTGCCAAAGTGCGAGAAGCGTTTCTGTTGGCCCACCTGGTCGAACTGAGCTACGCCGAGATCGCCGACCGCTTGGCTGTTTCAGCCAGCTCGGTCAAGCAGTACCTGTCCCGGGCCAACCGCGAATGCCTGTTCGCCATGACCTTCTGA
PROTEIN sequence
Length: 171
MPAPDLSLADDVTSLYVEHSTWLQGWLRRRIGDTFTAADVAQDTFLSLLDGKPATQEIREPRPFLATIANRLLAHRFRRQLLETAYLEALVGLPEEFAPSPETRLIALQSLQEIDRVLDGLPAKVREAFLLAHLVELSYAEIADRLAVSASSVKQYLSRANRECLFAMTF*