ggKbase home page

SCNpilot_expt_500_bf_scaffold_2393_2

Organism: SCNPILOT_EXPT_750_BF_Myxococcales_68_20

partial RP 37 / 55 MC: 6 BSCG 35 / 51 MC: 4 ASCG 7 / 38
Location: comp(826..1749)

Top 3 Functional Annotations

Value Algorithm Source
Putative transcriptional regulator n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6FXR1_9DELT similarity UNIREF
DB: UNIREF100
  • Identity: 44.3
  • Coverage: 280.0
  • Bit_score: 212
  • Evalue 6.50e-52
Putative transcription regulator protein {ECO:0000313|EMBL:AKF04726.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.5
  • Coverage: 253.0
  • Bit_score: 275
  • Evalue 6.80e-71
MerR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 36.3
  • Coverage: 248.0
  • Bit_score: 126
  • Evalue 1.10e-26

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sandaracinus amylolyticus → Sandaracinus → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 924
TTGAGCTCGCTCGCGGCCACGGTCTTAGGCTACGTGTTCGGGGTGGCCGAGGAGAACGCCCCGGCGGATGGGAGTGGTTCGCGCACCGCCACGGTGCTAAATGCGGCGGAGCCCTCCACGGGAGAAGACGATCCCGCTCCGGAACGACGAGAGCCGATGCGCGAGGCGAAGCCCCAGACCGAAGGCGAGACGAGCGCTGCCGACGCGAGCGTCGAGTACACGATCGACGACCTCGCGAGCGTCTCGCAGGTCCCGAGCCGTACGATCCGCTTCTATCAGTCGAAGGGCGTGCTCCCGAAGCCGATCATCAAGGGACGGGTCGCGTTCTACGGGAAGGCGCACCTCGAGCGCCTCGAGCTGATCGCGTCGCTGCAGGATCGCGGTCTCCGCATCGAGGCGATCCGCGAGCTCGTCCAGCGCATCGACAAGGGCGAGCTCGACATCGGCGAATGGCTCGGGCTCGAGGCGCAGCTCCAGCAACCCTGGGCGAACGACCAGCCCGTGACCGTGAGCGAGGACCAGCTCTACGAGCTCGCGGGACGCAAACGGGCCGGGCTGCTCAACGATCTCGTCCGCGGCAAGCTCGTCGAGCGACGAGGCAACGTCTTCTTCGTGCCGAGCCCCGCGCTCCTCGCGATCGGCGCGCGCCTCGAGGCTGCGGGGATCGACATCGACGACGTCGTCCGCGCCAAGGCGATCCTGGAGAAGTACGTCGGTCGGGCCGCGAAGGAGCTGACGGAGCTCGTCGTCTCGCGAGCGAACGACGGCACCGACGGCGACCTCGGCAAGGCCGTCGAAGAGCTCCGGCCGCTCGCGATGGAAGGCGTGCGCGTGATCTTCGCGCAGGCGATGCAGGCGGAGCTCCGCGAGCTCGCCCTCTCGGGCCGCTCCGCCAAGGTCGCGCGCCGACGCGCAAAGAAGTAG
PROTEIN sequence
Length: 308
LSSLAATVLGYVFGVAEENAPADGSGSRTATVLNAAEPSTGEDDPAPERREPMREAKPQTEGETSAADASVEYTIDDLASVSQVPSRTIRFYQSKGVLPKPIIKGRVAFYGKAHLERLELIASLQDRGLRIEAIRELVQRIDKGELDIGEWLGLEAQLQQPWANDQPVTVSEDQLYELAGRKRAGLLNDLVRGKLVERRGNVFFVPSPALLAIGARLEAAGIDIDDVVRAKAILEKYVGRAAKELTELVVSRANDGTDGDLGKAVEELRPLAMEGVRVIFAQAMQAELRELALSGRSAKVARRRAKK*