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SCNpilot_expt_500_bf_scaffold_5967_3

Organism: SCNPILOT_EXPT_750_BF_Myxococcales_68_20

partial RP 37 / 55 MC: 6 BSCG 35 / 51 MC: 4 ASCG 7 / 38
Location: 3055..3615

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane efflux protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PK22_9DELT similarity UNIREF
DB: UNIREF100
  • Identity: 43.2
  • Coverage: 183.0
  • Bit_score: 143
  • Evalue 3.00e-31
Uncharacterized protein {ECO:0000313|EMBL:EYF03801.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.0
  • Coverage: 184.0
  • Bit_score: 220
  • Evalue 1.60e-54
efflux transporter, outer membrane efflux protein similarity KEGG
DB: KEGG
  • Identity: 42.1
  • Coverage: 183.0
  • Bit_score: 138
  • Evalue 3.00e-30

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Taxonomy

Chondromyces apiculatus → Chondromyces → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 561
ATGGATCGCCGGCCCGATCTCCGCGCGGCGCAGGAGAGGACGGAGGCCCTGCGCGCTTCGGCCAAGGAGCCGCTCTACCGCTTGCTCCCCTCGCTCTCCGCTTCGGCGCAGGTCCGCTTCCTGCCCGATCCGCTGCCGACCGAGCGTGGGCGCGACGAGATCGCGACGCTGAACCTCCAGTGGAACATCTTCGACGCCGGCTTTCGCTACGCCGACCGGCGAACGCGTCTCGCGCAGGCCGAGAGCCAGGCGCTCGACGAGAGCTTGCTCCGTCGAACGATCGACAACGAGATCCGCGTCGCGCTCGTCTCGCTCAGGGCGGCGCGCGAGGCGTTCAAGATCGCCGACGACGCAATCGCCGCTGCCCAGCGGAGCTCCGACGAGACCGAGATCCTCTATCGCCAGGGCCTCGCACGCGCGATCGAGCTGACGGACGCCAACGCGCGTCGCTACGACGCCGAGGTCACCCGCGCCTCGGCGAAGCTCTCGATGGAGCAGGCATACCTCGAGCTGCGCTACGCGCTCGGCTTCGGGCCCATCGACGAAAACCTGTCCAGATGA
PROTEIN sequence
Length: 187
MDRRPDLRAAQERTEALRASAKEPLYRLLPSLSASAQVRFLPDPLPTERGRDEIATLNLQWNIFDAGFRYADRRTRLAQAESQALDESLLRRTIDNEIRVALVSLRAAREAFKIADDAIAAAQRSSDETEILYRQGLARAIELTDANARRYDAEVTRASAKLSMEQAYLELRYALGFGPIDENLSR*