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SCNpilot_expt_500_bf_scaffold_8332_4

Organism: SCNPILOT_EXPT_750_BF_Myxococcales_68_20

partial RP 37 / 55 MC: 6 BSCG 35 / 51 MC: 4 ASCG 7 / 38
Location: comp(2608..4305)

Top 3 Functional Annotations

Value Algorithm Source
histidine kinase n=1 Tax=Dyella ginsengisoli RepID=UPI000344E13F similarity UNIREF
DB: UNIREF100
  • Identity: 38.6
  • Coverage: 381.0
  • Bit_score: 205
  • Evalue 1.50e-49
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains {ECO:0000313|EMBL:EIL87197.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.4
  • Coverage: 329.0
  • Bit_score: 202
  • Evalue 1.30e-48
sigma-54 dependent DNA-binding response regulator similarity KEGG
DB: KEGG
  • Identity: 44.9
  • Coverage: 283.0
  • Bit_score: 200
  • Evalue 1.10e-48

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Taxonomy

Rhodanobacter fulvus → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1698
GTGACGCGACTCATCGTCGAAGCGCAGGGCCAGCTCCAGTCCGAGGTGGTGACGATGACGGACGGCGAAGGAGTCCTCATCGGGCGAACTCCCGACGCCGCTCTGCTCACGAGCCAGGAGGCCATTCCCTCAGCCGCCACGGTTCGGCCGCGCGCAATCGCAGCGCCGAGCGTGTCGGGAAATCACGCGGCGGCGTGGATGCAGGATGGCAGCGTGCACCTGGTCGACCTCGACAGTCGCAACGGAACCTGGGTCCGGCTGCCGAAGGGGAAGTCGCTTCGTCTACCGGTCGGTGGCGACGTCCACGTGCGTCTGGCGTCGTCGGCCGCGTTTGCAGGCTGCGATGCTCAGCCCGATCCGCCGCGCTATCTCGATCAGAGCGATTTCGGATCGGGCGTGGCCCAGTCGGTCCGCACCTGGTTGCAGCATCACGACGTGCCGGCACGAGCCTGGGCCGCGCCGCGGGACCGGGTCGAGGCGCCGACGGGCGTGACTGCCCTTCCGCTCGCCAACGGCGATGTCCTCTTCGTTGGGGTCGAGCGCACCGCCGATGTGATGTTCCACGAGCGGATGGCGCAGGTCTCTCGCTACGTCCGCACGCAGAACGCGCTCTACGAGGCAGAGGAGAACACGCGCAGCGACGGGATGATCCTCGCCTCGCCGGGCATTCGCCAGGTTCATCGGCGCGTGGTCGAGGTGGCGATGCAGAGCCTCCCCTCGCTGATTCTGCTCGGTCCGTCGGGCACCGGAAAGGAGCGCCTCGCGCAGGCGTATCATCGCCATCTCGGCCGGCCCGGACCGCTCGTCGCGATCAACTGCGCCACGCTCAGTCGCGATCGAATGATCGCCGATCTCTTCGGCGCCGAAGCGGGTGCATACACGGACGCGAAGCGCTCCATGATGGGCGCCGTCGAGCGGGCCGACGGAGGCACGCTGTTCCTCGACGAGCTCGGCGAGCTCCCCACCGACGTGCAGCCGATGCTCCTCCGGTTCCTCGAGACCGGCGAGTACCAGCGTCTCGGAGCGACGGGCCGCCCTCGCTTCGCGGACGTCCGTGTCGTCGCGGCGACGAACCGAGATCTGCGCCAGATGGTGCGCAACGGGGCATTCCGCGAAGATCTCTTCTTCCGGCTCGCGCTGGAGATCGTCGAGGTACCACCGCTGAGCGAGCGCTTCGCCGATGTCGAGGCTTACCTCCGGAGCCGCATGCTCGGAGAGACATCGGCCTACGACGCGCTCCAGCCTGCAGCGCGCGACCTCCTGAGGGCCTACTCGTGGTCGGGCAATTTCCGCGAGGTCATGAACCTCGTTCGCCGCTTCCCCAGCCCCGCTGCGCCGGACTCGCTCGATACCGACGCCGTTCGGCGCACGCTCGAGGCCGGCTCGCTCTCGCCGCTCACGACGCCGGTCGTGCGGCCACCGCCCGCGACGTCGGGAGTGGAGAGCTGGGTGGACTGGGTAGCCGCGAGCGCTGACGCGTTCTCGCAGGCGACGGCGCAGGACGGCCCGACCACGTGGGGCGACATGTCCGCGTTCATCGAGCAGTTCCTGAAGCCCTGGGCGCTCGCCCATCTCGCCGGCGTCGCGGACGCTCGCACGATCGACGACGTCTCGATCAGTCAGATCGCCGATCGGCTCAAGGCCGATCGCGGGACGGTCATCAAGCAGCTCCGACGCTACTTCGAGTCACGAGCCTGA
PROTEIN sequence
Length: 566
VTRLIVEAQGQLQSEVVTMTDGEGVLIGRTPDAALLTSQEAIPSAATVRPRAIAAPSVSGNHAAAWMQDGSVHLVDLDSRNGTWVRLPKGKSLRLPVGGDVHVRLASSAAFAGCDAQPDPPRYLDQSDFGSGVAQSVRTWLQHHDVPARAWAAPRDRVEAPTGVTALPLANGDVLFVGVERTADVMFHERMAQVSRYVRTQNALYEAEENTRSDGMILASPGIRQVHRRVVEVAMQSLPSLILLGPSGTGKERLAQAYHRHLGRPGPLVAINCATLSRDRMIADLFGAEAGAYTDAKRSMMGAVERADGGTLFLDELGELPTDVQPMLLRFLETGEYQRLGATGRPRFADVRVVAATNRDLRQMVRNGAFREDLFFRLALEIVEVPPLSERFADVEAYLRSRMLGETSAYDALQPAARDLLRAYSWSGNFREVMNLVRRFPSPAAPDSLDTDAVRRTLEAGSLSPLTTPVVRPPPATSGVESWVDWVAASADAFSQATAQDGPTTWGDMSAFIEQFLKPWALAHLAGVADARTIDDVSISQIADRLKADRGTVIKQLRRYFESRA*