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SCNpilot_expt_500_bf_scaffold_11654_2

Organism: SCNPILOT_EXPT_750_BF_Myxococcales_68_20

partial RP 37 / 55 MC: 6 BSCG 35 / 51 MC: 4 ASCG 7 / 38
Location: 949..1614

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1D6V0_MYXXD similarity UNIREF
DB: UNIREF100
  • Identity: 56.5
  • Coverage: 207.0
  • Bit_score: 228
  • Evalue 4.90e-57
ECF subfamily RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 56.5
  • Coverage: 207.0
  • Bit_score: 228
  • Evalue 1.50e-57
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=246197 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus xanthus (strain DK 1622).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.5
  • Coverage: 207.0
  • Bit_score: 228
  • Evalue 6.80e-57

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Taxonomy

Myxococcus xanthus → Myxococcus → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 666
ATGTGCACGGCCAAGATGCGTGAGCCCTCGAACCGCGCCGTGTCGGTCGCGACCGAGACGGGAGCGACGGAAGCGACGGACGCTACGCGACCGCTCGATACCGACGTGAAGCAGCTGCTCGTCGAGAACCATCGCGCGTTCCTTCGCTTCCTCGAGCAACGTGTCGGTCGTCGGGATCTCGCCGAAGACATCCTCCAGGAGGCCTTTGCCCGTGGACTCGACAAGCTCGAGGGGCTGCGAGACGGCGAGGCGGTGATCCCGTGGTTCTACCGGACGCTTCGCAACGCGACCATCGACTACTACCGTCGAACGAAGGTGGCGGGTCGGGCGCTCGCGCAGTTCGCCGAGGAGATCGAGACCGCCGAAGAGCCGGTCGAGATGGTGCGGGCGGAGGTCTGCTCGTGCGTGCTCCGCCTGGCCGGTACGCTCAAGCCCGAATACGCGGACGCGCTCCGGCGCGTCGAAGTCGACGGCGTCTCGATGCGGACGTTCGCCGAAGAGCGAGGCATCTCGAAGAGCAACGCGGCGGTTCGCGTCTTCCGGGCGAGGGAGGCGCTCCGCCGTCAGCTCGCCGTGTCATGCGGAACGTGCGCGGAGCACGGGTGTGTCTCGTGCACGTGTGCAATGCGCGACGATGGCGCCGGGCAGTGCGCGCCGGTGGTGTAA
PROTEIN sequence
Length: 222
MCTAKMREPSNRAVSVATETGATEATDATRPLDTDVKQLLVENHRAFLRFLEQRVGRRDLAEDILQEAFARGLDKLEGLRDGEAVIPWFYRTLRNATIDYYRRTKVAGRALAQFAEEIETAEEPVEMVRAEVCSCVLRLAGTLKPEYADALRRVEVDGVSMRTFAEERGISKSNAAVRVFRAREALRRQLAVSCGTCAEHGCVSCTCAMRDDGAGQCAPVV*