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SCNpilot_expt_500_bf_scaffold_14267_1

Organism: SCNPILOT_EXPT_750_BF_Myxococcales_68_20

partial RP 37 / 55 MC: 6 BSCG 35 / 51 MC: 4 ASCG 7 / 38
Location: 229..747

Top 3 Functional Annotations

Value Algorithm Source
ECF-family RNA polymerase sigma factor n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G8V0_SORC5 similarity UNIREF
DB: UNIREF100
  • Identity: 50.3
  • Coverage: 167.0
  • Bit_score: 153
  • Evalue 2.60e-34
ECF family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 50.3
  • Coverage: 167.0
  • Bit_score: 153
  • Evalue 8.30e-35
ECF-family RNA polymerase sigma factor {ECO:0000313|EMBL:CAN99073.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.3
  • Coverage: 167.0
  • Bit_score: 153
  • Evalue 3.70e-34

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Taxonomy

Sorangium cellulosum → Sorangium → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 519
ATGGCTGACCCGAATCTCACCGTCGAGGGCCTCATCCTGGAGCACCACGAGTTCGTCTGGCGGAGCCTTCGCCGGCTCGGCGTGCCCGACGCCGACCTCGAGGACGCGGTGCAGGAGGTCTATCTCGAGGCCTCGAAGCGGCTCGCCTCCATCACATCGGCGCGTGGGTTCCTGTTTCGCGCGTGCATGTACGTCGCCTCGCACGCGCGTCGGTCGATCCGGCGGCGGCGCGAAGTCCACGACGACGAGCTCCTGAAGCGACAGATCGATCCTCGGATTACGCCCGAGCAGGCGATCTCGCAGTCGGAAGCGCGTCAGGACCTGCAGCGCATGCTCGAGAAGATCCCGGAAGAGCCGCGCGCCATCTTCATTTTGTTCGAGCTCGAACGCCTCAGCACGGTGCAGATCGCCGAGCTGCTCGAGCTTCCCGTCGGAACCGTCGCGTCGCGTCTGCGCCGTGCACGAGAGCTCTTTATGCAGGCCGCCGCTCGAAAGGGCGCGCAGGAAAACCACCGATGA
PROTEIN sequence
Length: 173
MADPNLTVEGLILEHHEFVWRSLRRLGVPDADLEDAVQEVYLEASKRLASITSARGFLFRACMYVASHARRSIRRRREVHDDELLKRQIDPRITPEQAISQSEARQDLQRMLEKIPEEPRAIFILFELERLSTVQIAELLELPVGTVASRLRRARELFMQAAARKGAQENHR*