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SCNpilot_expt_500_bf_scaffold_17352_5

Organism: SCNPILOT_EXPT_750_BF_Myxococcales_68_20

partial RP 37 / 55 MC: 6 BSCG 35 / 51 MC: 4 ASCG 7 / 38
Location: 4721..5317

Top 3 Functional Annotations

Value Algorithm Source
ECF-family RNA polymerase sigma factor n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G5S7_SORC5 similarity UNIREF
DB: UNIREF100
  • Identity: 63.9
  • Coverage: 180.0
  • Bit_score: 227
  • Evalue 9.70e-57
ECF family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 63.9
  • Coverage: 180.0
  • Bit_score: 227
  • Evalue 3.10e-57
ECF-family RNA polymerase sigma factor {ECO:0000313|EMBL:CAN99069.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.9
  • Coverage: 180.0
  • Bit_score: 227
  • Evalue 1.40e-56

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Taxonomy

Sorangium cellulosum → Sorangium → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 597
ATGGCCTTCGCCATCCAGCGCGACATCCTCGATTCAGCGGTCACCGGCGACGCCGCAGCCCTCGACAGCGTCCTCAAGACGATCACGCCCCACGTCGAGCGGCAGCTCCTCCGGTACCCCGTGAGCGACGAGGACCGGCGCGACCTCCTCCAGGCGACCCTGATGCAGATCGTCCGCCGCCTCGGCTCGTTCCGCGCAGAGGCGAGCTTCTCGACCTGGCTGTTCCGCGTGACCGCGAACGAAGCGCTGATGCTCATGCGCTCGCGACGCCGCCATCGCGCGCGCTTCGTCGAGGGCCTCGAGTGGGAAGAGCTCGCGACGCTTCCCGCGATGAACGACACCGATCACGTCGACGGTGACCTCGGGATCAGCGCCCGGCAGCGTGACGAGCGCGTCCGCGATGCGCTCGGGGAGCTCCCCGACGACTACCGCGACGTCGTCATCGCCCACTACCACATGGACCTCGGCCTCCAGGAGATCGCCGACCGCCTCTCGATCACCGAGAGCGCCGTACGCTCGAGGTTGCACCGCGCACGCTCGCGCCTCCGTTCGCTGCTCGAAAAGCGAGACCTCGACGCGTACACTGTCGCGGCCTGA
PROTEIN sequence
Length: 199
MAFAIQRDILDSAVTGDAAALDSVLKTITPHVERQLLRYPVSDEDRRDLLQATLMQIVRRLGSFRAEASFSTWLFRVTANEALMLMRSRRRHRARFVEGLEWEELATLPAMNDTDHVDGDLGISARQRDERVRDALGELPDDYRDVVIAHYHMDLGLQEIADRLSITESAVRSRLHRARSRLRSLLEKRDLDAYTVAA*