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SCNpilot_expt_500_bf_scaffold_17853_2

Organism: SCNPILOT_EXPT_750_BF_Myxococcales_68_20

partial RP 37 / 55 MC: 6 BSCG 35 / 51 MC: 4 ASCG 7 / 38
Location: comp(2513..3304)

Top 3 Functional Annotations

Value Algorithm Source
Protocatechuate 3,4-dioxygenase beta chain n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8N0M9_CORCM similarity UNIREF
DB: UNIREF100
  • Identity: 48.0
  • Coverage: 221.0
  • Bit_score: 190
  • Evalue 1.70e-45
Protocatechuate 3,4-dioxygenase {ECO:0000313|EMBL:KFA90444.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.8
  • Coverage: 226.0
  • Bit_score: 191
  • Evalue 1.90e-45
pcaH; protocatechuate 3,4-dioxygenase beta chain similarity KEGG
DB: KEGG
  • Identity: 49.1
  • Coverage: 216.0
  • Bit_score: 190
  • Evalue 5.50e-46

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Taxonomy

Cystobacter violaceus → Cystobacter → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 792
ATGACGACGAAGAACATCGACGCCCTTCCGTTGCTCTCCCGACGCCAGGCCTCGAGGGGAATCCTCCTCGCGATCGGCGGAGCTGCGCTCTTTGCTTGCGGCGGTGGCTCGACGAACGGCACTGGCGCTCAAGCTGGTAACGGAAGCGGCAACGGAACGGGCACGGGTGACGGCAACGGCACGACGACCGATCCGGAGGGCACGACCACGGGTTCGGCAACGGAGTGGGCGAGCGGCGGTACGAAGTCGATGACGGGGGCCAGCTCGTACCCGGATCCCTTCGCGACGCCAGCGACCGCATGCGTCCTCGCCGTGGCCGCGACCGAGGGCCCGTGCACCGAGGCGGCCGACCAGGTCCGGAAGGACATCAGCGAGGGCTACACCGGGCTCCCGATGCGCCTCGCGCTCCGCGTGGTCGACAGCTCGTGCAAGCCCATCGCCGGAGCCAAGGTGAAGGTCTGGCACACCCAGATCAGCGGCAGCTACTCGGGCGACACGCCGAACAACCAGATGTGCCTGAAGGATCGGGCAGACTCCGCGAAGCACTACTTCCGCGGGGCCCAGACGACCGACGAGAACGGGCGCGTCGACTTCGACAGCTGCTTCCCCGGTTGGTACAGGGGCCGGGCGGTGCACATCCATTTCACCGTCTCGCTCAGCTCGTGTTCGATCAGGATCTCGTCAACGAGATCTTCACGAACCACGCCGAGTACAAAGGCTACGGCTTGCCCGACACGACCAACAGCACCGACAACATCGTCGGGCGCGGCGACCTCGCAGGCTACACGCTGA
PROTEIN sequence
Length: 264
MTTKNIDALPLLSRRQASRGILLAIGGAALFACGGGSTNGTGAQAGNGSGNGTGTGDGNGTTTDPEGTTTGSATEWASGGTKSMTGASSYPDPFATPATACVLAVAATEGPCTEAADQVRKDISEGYTGLPMRLALRVVDSSCKPIAGAKVKVWHTQISGSYSGDTPNNQMCLKDRADSAKHYFRGAQTTDENGRVDFDSCFPGWYRGRAVHIHFTVSLSSCSIRISSTRSSRTTPSTKATACPTRPTAPTTSSGAATSQATR*