ggKbase home page

SCNpilot_expt_500_bf_scaffold_27047_1

Organism: SCNPILOT_EXPT_750_BF_Myxococcales_68_20

partial RP 37 / 55 MC: 6 BSCG 35 / 51 MC: 4 ASCG 7 / 38
Location: comp(2..397)

Top 3 Functional Annotations

Value Algorithm Source
lpxB; lipid-A-disaccharide synthase (EC:2.4.1.182); K00748 lipid-A-disaccharide synthase [EC:2.4.1.182] similarity KEGG
DB: KEGG
  • Identity: 44.6
  • Coverage: 130.0
  • Bit_score: 104
  • Evalue 3.40e-20
lipid-A-disaccharide synthase n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI0003687EDC similarity UNIREF
DB: UNIREF100
  • Identity: 45.1
  • Coverage: 133.0
  • Bit_score: 109
  • Evalue 2.60e-21
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 47.7
  • Coverage: 132.0
  • Bit_score: 110
  • Evalue 1.60e-21

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Acidobacteria_67_28 → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 396
GTGACGGGCGATCTCCTCGTCGTCGCGGGAGAGGCGTCCGGCGATCGCGCTGCTGCGGCCGTCATCGCGAAGCTCCGCGGCGTTCGAGCGTTCGGGATGGGCGGTGGCGCCCTCCAACGCGAAGGCGTCGAGCTCGTCGCCGACCTCCGGAGCACGACGGCTCTCGGCGTCACCGAGGTCGCGCGGCGGGCATACGGCGTCGGCTTGGCCTACGGGAAGCTCCGCGCCGCGATCCGGCGCCAGAAGCCGGCCGCAGCGCTCCTCGTCAACTACACCGAGTTCAACGCACGCCTCGCTCCGACGCTGTGGAGCGAAGGGACGCGCGTGCTCTGGTACGGCGCCCCCCAGATCTGGGCCTGGCGCTCGGGCCGCGCGAAGCCGCTCCGTCGTCACCTC
PROTEIN sequence
Length: 132
VTGDLLVVAGEASGDRAAAAVIAKLRGVRAFGMGGGALQREGVELVADLRSTTALGVTEVARRAYGVGLAYGKLRAAIRRQKPAAALLVNYTEFNARLAPTLWSEGTRVLWYGAPQIWAWRSGRAKPLRRHL