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SCNpilot_expt_500_bf_scaffold_45226_2

Organism: SCNPILOT_EXPT_750_BF_Myxococcales_68_20

partial RP 37 / 55 MC: 6 BSCG 35 / 51 MC: 4 ASCG 7 / 38
Location: 858..1232

Top 3 Functional Annotations

Value Algorithm Source
Sigma-54 dependent DNA-binding response regulator n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GEP8_SORC5 similarity UNIREF
DB: UNIREF100
  • Identity: 79.6
  • Coverage: 93.0
  • Bit_score: 148
  • Evalue 6.20e-33
sigma-54 dependent DNA-binding response regulator; K07714 two-component system, NtrC family, response regulator AtoC similarity KEGG
DB: KEGG
  • Identity: 79.6
  • Coverage: 93.0
  • Bit_score: 148
  • Evalue 1.90e-33
Sigma-54 dependent DNA-binding response regulator {ECO:0000313|EMBL:CAN93040.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.6
  • Coverage: 93.0
  • Bit_score: 148
  • Evalue 8.60e-33

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Taxonomy

Sorangium cellulosum → Sorangium → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 375
ATGGGCGGACGGAAAGAATTGCGAGGTGAGCTCGTCCGCATTCGCGAAGGCCTGAATAGTGGTATGCTCTGCCTCGCAACTTTTGCGGACACACAGATGCGCCGGGTCCTTGTCGTCGACGATGAAGAGAACATCCGCCTCGTCCTGAAGACGCTTCTCAAGCGCCATGGCTACGACGTGGAGGTCGCCGACAGCGGCGAAGCGGCGCTCGCGCTCGTGGACTCGTTCGGCCCGGACGTCATCCTCACCGACGTCCGGATGCCCAAGATGAACGGTCTCGATCTGCTCGCGACGCTGAAGGCGAAGCAGAACCCGGCGACCGTGATCGTGATGAGCGCGTACGGCAGCGTCGACCTCGCGCTCGAGGCGATGAAG
PROTEIN sequence
Length: 125
MGGRKELRGELVRIREGLNSGMLCLATFADTQMRRVLVVDDEENIRLVLKTLLKRHGYDVEVADSGEAALALVDSFGPDVILTDVRMPKMNGLDLLATLKAKQNPATVIVMSAYGSVDLALEAMK