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SCNpilot_expt_500_bf_scaffold_13976_2

Organism: SCNpilot_P_inoc_Microbacterium_67_7_partial

partial RP 9 / 55 BSCG 11 / 51 ASCG 7 / 38
Location: comp(89..451)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix HxlR type n=2 Tax=Microbacterium RepID=H8E696_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 99.2
  • Coverage: 120.0
  • Bit_score: 236
  • Evalue 1.30e-59
Helix-turn-helix HxlR type {ECO:0000313|EMBL:EIC07693.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.2
  • Coverage: 120.0
  • Bit_score: 236
  • Evalue 1.80e-59
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 77.5
  • Coverage: 120.0
  • Bit_score: 189
  • Evalue 5.60e-46

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Taxonomy

Microbacterium laevaniformans → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 363
ATGGCGGTAAGTCTCGCGGAAATACGGACAGATCACGACCAGGTCTTCACCGAGAACTGCCCCACTCGCACCGTGCTGGATCACGTGATGAGCAAGTGGGGCATCCTCGTGCTGGTGGCGCTCAGCGAGGGCACGGCTCGGTGGGGTCAGCTGCGACGAGCGGTCGATGGCATCAGCGAGAAGATGCTCGCGTCGACGCTGCGCACCCTCGAGGCCGACGGGCTGGTGGTCCGTACCGCCTACCCCGAGGTGCCGCCGCGCGTCGAGTATGCCCTCACTGCTCGCGGAGACGAGCTCATGCAGCGAGTGCTGCCGCTGATGGCCTGGATCGCCGACAACGCGGACGAGATCGTTGCGCGCTGA
PROTEIN sequence
Length: 121
MAVSLAEIRTDHDQVFTENCPTRTVLDHVMSKWGILVLVALSEGTARWGQLRRAVDGISEKMLASTLRTLEADGLVVRTAYPEVPPRVEYALTARGDELMQRVLPLMAWIADNADEIVAR*