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SCNpilot_expt_500_bf_scaffold_8360_4

Organism: SCNPILOT_EXPT_750_P_Alphaproteobacteria_36_9_partial

partial RP 28 / 55 MC: 1 BSCG 28 / 51 MC: 2 ASCG 7 / 38
Location: comp(1788..2165)

Top 3 Functional Annotations

Value Algorithm Source
geranylgeranyl pyrophosphate synthase; K02523 octaprenyl-diphosphate synthase [EC:2.5.1.90] similarity KEGG
DB: KEGG
  • Identity: 61.1
  • Coverage: 108.0
  • Bit_score: 127
  • Evalue 2.70e-27
Polyprenyl synthetase n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TXB8_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 58.2
  • Coverage: 110.0
  • Bit_score: 129
  • Evalue 1.70e-27
Farnesyltranstransferase {ECO:0000313|EMBL:AIL12322.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.6
  • Coverage: 115.0
  • Bit_score: 178
  • Evalue 7.80e-42

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Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 378
ATGGCACAAGAAGATTTAGGAATTTTTAAAAAAGAACATAGAAAAACAGCAAGTCTAGAGTCATTAATGTCGCTTGTAAAAATCGATCTTGCTCAAGTCAACGCACTTATTTTGGAAAGACTTCAAAGTCCCGTAAAGTTAATTGCAGAAATAGCTGGTTATCTAATTAAGAGTGGGGGAAAACGTTTAAGACCTGTTTTAACATTAGCAAGCGCTCAACTTTTTAATTATCAAGGGAATAAAGCAATAGGTTTAGCTGCGTGCGTTGAATTTATTCACACAGCGACCCTTTTACATGATGATGTGGTTGATGACAGTATTTTGCGCAGAGGACATGCATCCACTTATGGTCGAGCAAGAATCGCTTGCCGCTCTTAA
PROTEIN sequence
Length: 126
MAQEDLGIFKKEHRKTASLESLMSLVKIDLAQVNALILERLQSPVKLIAEIAGYLIKSGGKRLRPVLTLASAQLFNYQGNKAIGLAACVEFIHTATLLHDDVVDDSILRRGHASTYGRARIACRS*