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SCNpilot_expt_500_bf_scaffold_10166_9

Organism: SCNPILOT_EXPT_750_P_Alphaproteobacteria_36_9_partial

partial RP 28 / 55 MC: 1 BSCG 28 / 51 MC: 2 ASCG 7 / 38
Location: comp(4949..5629)

Top 3 Functional Annotations

Value Algorithm Source
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.5
  • Coverage: 212.0
  • Bit_score: 361
  • Evalue 6.90e-97
DNA topoisomerase I (EC:5.99.1.2) similarity KEGG
DB: KEGG
  • Identity: 46.2
  • Coverage: 223.0
  • Bit_score: 193
  • Evalue 9.50e-47
DNA topoisomerase I n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225B1E6 similarity UNIREF
DB: UNIREF100
  • Identity: 47.8
  • Coverage: 207.0
  • Bit_score: 200
  • Evalue 2.50e-48

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Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 681
TTGCGGACGTTATTAGCNNNNNNNNNNNNNNGAGAAGTTGATTTTTATGCCATAGAAGGAAGTTCTGATGCTCGGCAATGTCCCCAGTGTAAGGAAGGAAAACTCAACCTTAAATTGGGGAAATGGGGCGCATTCGTGGGCTGTTCAAACTATCCAACATGTGGATTCACACGAAAGCTTGTAAGTGATGGGACGGAGGAAGAAGCACAAGCTCAAGAAGGTGAAGAGAAGGCAGCCTCAAAAAATATATTTGAGCCCAAAACGCTAGGGAAAGATCCAGCCTCAAATGCAACCGTATCTTTGAGAAAAGGACCTTATGGATTTTATCTTCAATGGGATGGTGAAGAACAATCTATTCAAACACAACCAAAAGGCAAAGGGAAGAAAGCGGATGTTGCAAAACCAAAACGGGTCGCAATTCCAAGAGGACGTTCTGTCGAAAGTATCACGCTTGAAGATGCTTTGGCATTAGGGGCTTTGCCACGAACTGTCGGAACACATCCAGAAACGGGTAAAACAATTACCGCAGCAATCGGACGCTTTGGTCCTTACGTAAAACATGAAAGTACCTTTAAGTCGATTGGGAAAGGTGATGACGTTTTAACGGTGACACTCGAACGGGCGTTAGAACTTCTTAGCGAAGAGTCTGAAAAGAAAAAAGTGTTTAAGAAGAAATCATAA
PROTEIN sequence
Length: 227
LRTLLXXXXXXEVDFYAIEGSSDARQCPQCKEGKLNLKLGKWGAFVGCSNYPTCGFTRKLVSDGTEEEAQAQEGEEKAASKNIFEPKTLGKDPASNATVSLRKGPYGFYLQWDGEEQSIQTQPKGKGKKADVAKPKRVAIPRGRSVESITLEDALALGALPRTVGTHPETGKTITAAIGRFGPYVKHESTFKSIGKGDDVLTVTLERALELLSEESEKKKVFKKKS*