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SCNpilot_expt_500_bf_scaffold_13246_2

Organism: SCNPILOT_EXPT_750_P_Alphaproteobacteria_36_9_partial

partial RP 28 / 55 MC: 1 BSCG 28 / 51 MC: 2 ASCG 7 / 38
Location: comp(786..1247)

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimP n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NYL5_AZOS1 similarity UNIREF
DB: UNIREF100
  • Identity: 49.3
  • Coverage: 150.0
  • Bit_score: 150
  • Evalue 1.20e-33
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.3
  • Coverage: 150.0
  • Bit_score: 153
  • Evalue 3.30e-34
hypothetical protein; K09748 ribosome maturation factor RimP similarity KEGG
DB: KEGG
  • Identity: 49.3
  • Coverage: 150.0
  • Bit_score: 150
  • Evalue 3.70e-34

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Taxonomy

Skermanella stibiiresistens → Skermanella → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 462
ATGGACCTTATAAAAAAGATAAAAGACATCATCGAACCTACCTTGAATAGTTTGGGTTATCATATTGTTCGTGTGCAATTTTCAGGACAAGTGCGCCCTACCCTTCAAGTGATGATTGAAAAATTAGATTTAAGTGCTTTATCAATCGATGATTGCGTAAAAGCAAGTCGGCAGATTTCTGCTTTGTTAGATGTAGAAGATCCTATTGATACCGCTTATCAACTTGAAGTCACATCCCCAGGACTTGACCGCCCTCTTGTAGCTTTGCAAGATTATGTGAGGTTTCAAGGTGCCGAGATAAAACTTGAAACAGTCTCCCCTCTTGAAGGACGTAAACGTTTCAAAGGGATCTTGTCGCAAGTAAAAGAAGGAACAATCTTCCTTAAACCTGAAGATAGCGAGGCAACTCTTGATATTGCTTATGAAAATATTCTTAAAGCAAAATTGGTGCCGCAATTTTAA
PROTEIN sequence
Length: 154
MDLIKKIKDIIEPTLNSLGYHIVRVQFSGQVRPTLQVMIEKLDLSALSIDDCVKASRQISALLDVEDPIDTAYQLEVTSPGLDRPLVALQDYVRFQGAEIKLETVSPLEGRKRFKGILSQVKEGTIFLKPEDSEATLDIAYENILKAKLVPQF*