ggKbase home page

SCNpilot_expt_500_bf_scaffold_13359_7

Organism: SCNPILOT_EXPT_750_P_Alphaproteobacteria_36_9_partial

partial RP 28 / 55 MC: 1 BSCG 28 / 51 MC: 2 ASCG 7 / 38
Location: 3899..5722

Top 3 Functional Annotations

Value Algorithm Source
DNA topoisomerase 4 subunit B {ECO:0000256|HAMAP-Rule:MF_00938}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00938};; Topoisomerase IV subunit B {ECO:0000256|HAMAP-Rule:MF_00938}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.7
  • Coverage: 592.0
  • Bit_score: 1061
  • Evalue 0.0
parE; DNA topoisomerase IV subunit B (EC:5.99.1.-); K02622 topoisomerase IV subunit B [EC:5.99.1.-] similarity KEGG
DB: KEGG
  • Identity: 60.1
  • Coverage: 594.0
  • Bit_score: 736
  • Evalue 8.10e-210
DNA topoisomerase 4 subunit B n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y404_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 60.5
  • Coverage: 593.0
  • Bit_score: 744
  • Evalue 9.40e-212

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1824
ATGCAATGGATGAAGCTGTTGCTGGTCATGCCTCGAGAATNNNNCTCAGCTGATGGTTTTGTTACGATCCGTGATAACGGACGAGGTATCCCAATTGATCCTCACCCTAAATTCCCAAATCAATCTGCTCTAGAAGTTATTCTTACAACTTTACACTCAGGTGGAAAATTTGGGGGAGATGCTTATGAGACATCTGGCGGACTTCATGGCGTAGGACTCTCAGTCGTCAACGCACTTTCAGATCATTTAACTGTTGAAATTGCTTCTCAAAAGCAATTATGGCAACAACATTATAGTCGTGGCCAAGCTATTTCTCCTTTAATGAACAACGGACCTATTAGTAATCGCCGAGGAACGACAATTCGATTTCATCCAGACCCAGAGATATTTGTTTTAAATTCTCACTTTAAGCCTCTGATTGTTTATAAAATGATCCGCTCAAAAGCATACCTTTTTAAAGGTGTAGAAATTCTTTGGAGTTGTGATGCTTCCCTTCTTGAGTCTGAAGAGAATGTCCCCCTTAAAGATACATTTCACTTCCCTGGAGGGCTTAAAGATTACCTTCTTGAGACTTTAAAAGATACACCTCAAGCCTGTACTGAGCCCTTTAGTGGAGAAGCAGAGCTTCCAGATAATTTTGGACGAATTGAATGGGCTGTAACATGGTCACTTGAAGAAGAAGGATTTTCACATTCTTATTGTAATACGGTTCCTACACCTTTAGGAGGGACACATGAGATGGGATTTCGGCAGGCTCTGACAAAATCAATTCGTGGTTTTGGAGAGCGTCTTGGAAATCGAAAAGCTGCCCAAATTACCTCAGAAGATTGTACTTCAAGTGCTGCCATGCTTCTTTCTGCCTTTATACGAAATCCACAATTTCAGGGGCAAACGAAAGAAAAATTAGTGAATAGTGAAATCACACGTGCTGTTGAAACAGTTATTAAGGATCACTTAGACCATTGGTTAACGGGCCAACGAGATATTGCAGAAGCTCTTATTAATCACATCCTTGAAAGGGTTGATGAACGTTTAAGGCGCAAAGAAGCTAAAGAAACCTTACGGCAAACACCAACTCGACGCTTACGCTTACCTGGAAAACTTGCTGATTGCATTTCTGAAAATCCTCATGAAACAGAAATCTTTCTCGTTGAAGGAGATTCAGCTGGTGGCCCAACAAAGCGTGGACGGGATCGGAAAATACAAGCCGTGTTACCTTTACGCGGGAAAATTCTGAATGTTGCTAGCGCTTCCAATGATAAGCTTAGGACAAACCAAGAAGTTCAAGACTTGGGGAAAGCTTTAGGATGTGGAACGGGTAAAAACTGTGATACATCACAGTTACGCTATGGACGCGTTATTATTCTAACAGATGCTGATGTCGATGGAGCTCATATTGCTTCCCTGTTGTTAACTTTTTTCTTCCAAGAAATGCGTCCACTAATTGAAAAAGGGCATATTTACATTGCCTTACCCCCGCTTTATCGAATTGTACAAGGAACAAAAAGTCTTTATGCCCGCGATGATGCTCATCGTGATGAACTCTTGAAAAAGGAATTTTTAGGTCGAGGAAAAATTGAGATTAGCCGTTTCAAAGGACTGGGCGAAATGGATTGGCAACAACTTAAAGAAACAACTTTAGATCCAAAAACAAGGACTCTGTTGCAAGTGCACCTTCCAAAAAATGAAATTTCTGCAAATTTTGATAGTAATGAAACCCTGACGATAGAAGGTTTTGTTGAGGCGCTCATGGGACGCCGCCCTGAAAAGCGCTTTAATTTTATCCAAGCCAATGCTGCATTTGCGCAAAGTATAGATATATAG
PROTEIN sequence
Length: 608
MQWMKLLLVMPREXXSADGFVTIRDNGRGIPIDPHPKFPNQSALEVILTTLHSGGKFGGDAYETSGGLHGVGLSVVNALSDHLTVEIASQKQLWQQHYSRGQAISPLMNNGPISNRRGTTIRFHPDPEIFVLNSHFKPLIVYKMIRSKAYLFKGVEILWSCDASLLESEENVPLKDTFHFPGGLKDYLLETLKDTPQACTEPFSGEAELPDNFGRIEWAVTWSLEEEGFSHSYCNTVPTPLGGTHEMGFRQALTKSIRGFGERLGNRKAAQITSEDCTSSAAMLLSAFIRNPQFQGQTKEKLVNSEITRAVETVIKDHLDHWLTGQRDIAEALINHILERVDERLRRKEAKETLRQTPTRRLRLPGKLADCISENPHETEIFLVEGDSAGGPTKRGRDRKIQAVLPLRGKILNVASASNDKLRTNQEVQDLGKALGCGTGKNCDTSQLRYGRVIILTDADVDGAHIASLLLTFFFQEMRPLIEKGHIYIALPPLYRIVQGTKSLYARDDAHRDELLKKEFLGRGKIEISRFKGLGEMDWQQLKETTLDPKTRTLLQVHLPKNEISANFDSNETLTIEGFVEALMGRRPEKRFNFIQANAAFAQSIDI*