ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

SCNpilot_expt_500_bf_scaffold_13632_2

Organism: SCNPILOT_EXPT_750_P_Alphaproteobacteria_36_9_partial

partial RP 28 / 55 MC: 1 BSCG 28 / 51 MC: 2 ASCG 7 / 38
Location: 598..978

Top 3 Functional Annotations

Value Algorithm Source
fabH; 3-oxoacyl-ACP synthase III (EC:2.3.1.180); K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] similarity KEGG
DB: KEGG
  • Identity: 43.1
  • Coverage: 123.0
  • Bit_score: 106
  • Evalue 6.60e-21
3-oxoacyl-[acyl-carrier-protein] synthase III n=1 Tax=Azospirillum sp. (strain B510) RepID=D3NZ96_AZOS1 similarity UNIREF
DB: UNIREF100
  • Identity: 43.1
  • Coverage: 123.0
  • Bit_score: 106
  • Evalue 2.10e-20
3-oxoacyl-ACP synthase {ECO:0000313|EMBL:KGL36704.1}; TaxID=1548150 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Helicobacter.;" source="Helicobacter sp. MIT 05-5294.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.9
  • Coverage: 121.0
  • Bit_score: 115
  • Evalue 4.80e-23

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Helicobacter sp. MIT 05-5294 → Helicobacter → Campylobacterales → Epsilonproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 381
ATGGTACCGGGCAGCAATTCCTGCCTAACTTGTGAAGACAAGTTGCAAATGAATGGCCGTGATGTCGTTAGTAACGCCTTAAGAGAAGTACCTGAGAATATTAATTCTTTACTGCGATCTTCTGGTCTAAAAATTTCAGATATTGATCTGTTTGTGTTACACCAGGCATCCAGAGTAATGGTGGAATCCTTAAGAGATTTACTAATTTTAGATGAAGAAACTGCCCCTTATGAGATTATGAACTTGGGCAATACGATTTCTTCATCAATTCCAATTGTTTTGAGCAAACATGTGGATCAGCTAACAAAAGATAACATTCTAATTTCTGGATTTGGTGTTGGTTTTTCATATGCTTCTAGTCTTCTTAAACTCATAAAATAG
PROTEIN sequence
Length: 127
MVPGSNSCLTCEDKLQMNGRDVVSNALREVPENINSLLRSSGLKISDIDLFVLHQASRVMVESLRDLLILDEETAPYEIMNLGNTISSSIPIVLSKHVDQLTKDNILISGFGVGFSYASSLLKLIK*