ggKbase home page

SCNpilot_expt_500_bf_scaffold_18339_4

Organism: SCNPILOT_EXPT_750_P_Alphaproteobacteria_36_9_partial

partial RP 28 / 55 MC: 1 BSCG 28 / 51 MC: 2 ASCG 7 / 38
Location: 1583..3562

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein {ECO:0000313|EMBL:AIL13481.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.8
  • Coverage: 674.0
  • Bit_score: 1078
  • Evalue 0.0
conjugal transfer relaxase TraA id=4935065 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Odyssella thessalonicensis genus=Candidatus Odyssella taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + similarity UNIREF
DB: UNIREF100
  • Identity: 46.8
  • Coverage: 698.0
  • Bit_score: 595
  • Evalue 5.90e-167
traA; Conjugal transfer protein similarity KEGG
DB: KEGG
  • Identity: 35.0
  • Coverage: 600.0
  • Bit_score: 303
  • Evalue 1.90e-79

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1980
ATGGCATTGGCTCATGGCCGCTTAAAAATGATCTCTCGTTCTAATCGCAATACAGTACGAGCTTTAGCTTATCGCACAGGCTGCAAAGTCTATGACCATAGGGTAGGCGAGTTGATGATCGCCCGTAAGAAAATGCATGAAGTGCAATATGTTGAATTATTGCTTCCTAAAGATGCACCAGAATGGGCTTTAGAGTTAAGAAATCTGATAGCATTAGATCGCAAAAAAGGCATCCAGAAGTTTTCTGATATCGTTGAAGCATCTGAGAAGAGAAAAGATGCTCAAGTCTATCGAGAATATGAATTTGCTCTTCCTCGTGAATTTACAGATGAACAATGTAGCCAAGGGATGACCGTACTTGCCAACTTTCATCTTGATATTGATGAAGAGTCAGGAGAAAGAAAACCTCATTGTCATGCTTTAATGCTAACCCGTAGGCTTACAGATAAAGGGTTGCATATAAAAAAAGAAGTCGAGTGGAATCGAAGAAGTTTAGGAGCAGAGTTAAGAGAACAGTTTGTTGCTTACACAAACTTCCACCTTAAGATGCATGGCTTTGATGAAAGGCTAGATCATAGATCTTATGCTGAAAGAGGGATTGATCTTGAGGCTGAGCCTAAGCGAGGCACGAATATCAAGGATATGGAATTTAGGGTTGGGAATAATCCAAAAGATCTCTTTTCATCTGTAACTTCAGAAAAAGCAATTACTTTTCGAGAAACAAAGCTCAGAAATGTTTGCCGTATCATTAGGAAGCCAGAGATTGTTCTTGATGTTGTCAGTAAACATCATTCTACTTTTATGTGGGGTGATGTGGAGAAAGTGCTTAATCGTTATATTGATGATCGCGATCTTTACCAGCAATTAGAGCAGAAGCTCAAATCCTCTAAAGAGCTGGTATTACTAAGGTATGAGCCTGTTAAAAACAAAGAGGGTTCCTTAGAAGATTGCTCCATTTACACGACCAAATCCATGGTTGAGGCAGAAATAAATCTAGTGCTCCTAGCTGAAAGACTGAGCAAAGAAAAAAGCGATGAAGTCTATCGTCATAAAGTGAACGCTGTTATCACTCAATATGACAAAAAACTGTCAAAGCATGGCGGATTATCACTTGATCAAAAGAAAGCACTCCACCACATTACAGCGCCAAACCAGCTTTCATGCATTCTTGGATATGCAGGTGCTGGCAAGACCATAGTTTTAGAGGCGGCAAAGGAAATATGGGAAGCAGAAGGGTATAGGGTTTATGGCCTTGCTCCTACAGGGCGGGCAGCACAAAATCTAGCGCAATCAGGTATTCCATCACAAACTCTTCACAAATTCCTTAAATTCCATAAAGATGGAAGGTGTCAATATAAGGAGAACTCTGTCCTTGTGCTGGATGAAGCAGGTATGGTGGATACCTCAAGGTTTGATGAATTCTTGCAAGCTGTTGATGATTTAAAAGTTAAGGCTGTGATTGTAGGAGATGGGGCACAGCTGCAGCCCGTTGAGGCAGGCCCTGCTTTTAGACTTGTCACGCAAAGGGTAGGCTTTTCTCAGCTTGAAAGGGTGGTACGTCAGCAAGATGAATGGCAACAGGGTGCAACAAAGCTCTTTGGAACCTTTAAGACAAGAGAAGCTCTCCAAGCTTATCATCAAAAGGGGTATGTGCAGTTTATTGAAGAAAAAGTAATTCCAATTACTGAGCTGATCGAGACAAAAGATCACTCAAAAATTGTTGAAGCCTATAACCTCTCCCGTCGTATGGCAGGGAACATTTACTACTCTATGATTGAAGACATTAATACTCAAAATCCTGAGAAGAAAGAACTTTATAAACTTATTAGCTCTCATGAAGACTACGCCCTTTATCGAGAGTGGCGTGAGCTTAAGATGGTGTGTACAAGCTACATGAAGCAGAATCTTGATGAGTGCCGACCTTTGATGAAAGAGTTGGGCGTTGATCCTCAACACTTTGCTGAGCAATTTGTTGATAAG
PROTEIN sequence
Length: 660
MALAHGRLKMISRSNRNTVRALAYRTGCKVYDHRVGELMIARKKMHEVQYVELLLPKDAPEWALELRNLIALDRKKGIQKFSDIVEASEKRKDAQVYREYEFALPREFTDEQCSQGMTVLANFHLDIDEESGERKPHCHALMLTRRLTDKGLHIKKEVEWNRRSLGAELREQFVAYTNFHLKMHGFDERLDHRSYAERGIDLEAEPKRGTNIKDMEFRVGNNPKDLFSSVTSEKAITFRETKLRNVCRIIRKPEIVLDVVSKHHSTFMWGDVEKVLNRYIDDRDLYQQLEQKLKSSKELVLLRYEPVKNKEGSLEDCSIYTTKSMVEAEINLVLLAERLSKEKSDEVYRHKVNAVITQYDKKLSKHGGLSLDQKKALHHITAPNQLSCILGYAGAGKTIVLEAAKEIWEAEGYRVYGLAPTGRAAQNLAQSGIPSQTLHKFLKFHKDGRCQYKENSVLVLDEAGMVDTSRFDEFLQAVDDLKVKAVIVGDGAQLQPVEAGPAFRLVTQRVGFSQLERVVRQQDEWQQGATKLFGTFKTREALQAYHQKGYVQFIEEKVIPITELIETKDHSKIVEAYNLSRRMAGNIYYSMIEDINTQNPEKKELYKLISSHEDYALYREWRELKMVCTSYMKQNLDECRPLMKELGVDPQHFAEQFVDK