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SCNpilot_expt_500_bf_scaffold_19969_2

Organism: SCNPILOT_EXPT_750_P_Alphaproteobacteria_36_9_partial

partial RP 28 / 55 MC: 1 BSCG 28 / 51 MC: 2 ASCG 7 / 38
Location: comp(1206..1601)

Top 3 Functional Annotations

Value Algorithm Source
Ribosome-binding factor A n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AFH4_AZOBR similarity UNIREF
DB: UNIREF100
  • Identity: 47.3
  • Coverage: 129.0
  • Bit_score: 121
  • Evalue 6.50e-25
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.9
  • Coverage: 132.0
  • Bit_score: 234
  • Evalue 9.70e-59
rbfA; ribosome-binding factor A similarity KEGG
DB: KEGG
  • Identity: 47.3
  • Coverage: 129.0
  • Bit_score: 121
  • Evalue 2.00e-25

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Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 396
ATGACCAGATCACATAAATCTTCTTCTGGACCAACCCAACGTCAGCTTCGCGTTGGGGAAGAGATTCGTCATATTCTTGCAACCATTTTAAGTCGAGGAGAGTATTCGCACCCTCTTCTTGAAGAAGCAAGCGTGATCGTCACTGAAGTTCGCATTAGTCCAGATTTAAAACATGCAAAAGTATTTATTACTTCTTTAGGTGGTAAAAATATGGAAGCAGTTGTAAAAATTTTAAATGAAGCAGCTCATCAATTACGCAATTCTTTAGGACGTGCACTTACAATCAAGTACACCCCTCACCTTCAATTCAAGGCAGATACGACTTTTGAAGAAGCGGCTAAAATCGCCTCACTGCTTCACTCAGAACATGTCGCTCAAGATTTAAGGAAAAAATAG
PROTEIN sequence
Length: 132
MTRSHKSSSGPTQRQLRVGEEIRHILATILSRGEYSHPLLEEASVIVTEVRISPDLKHAKVFITSLGGKNMEAVVKILNEAAHQLRNSLGRALTIKYTPHLQFKADTTFEEAAKIASLLHSEHVAQDLRKK*