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SCNpilot_expt_500_bf_scaffold_22547_1

Organism: SCNPILOT_EXPT_750_P_Alphaproteobacteria_36_9_partial

partial RP 28 / 55 MC: 1 BSCG 28 / 51 MC: 2 ASCG 7 / 38
Location: 1..1077

Top 3 Functional Annotations

Value Algorithm Source
Extracellular serine protease {ECO:0000313|EMBL:CEL29408.1}; EC=3.4.21.- {ECO:0000313|EMBL:CEL29408.1};; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 24.8
  • Coverage: 339.0
  • Bit_score: 73
  • Evalue 7.80e-10
Outer membrane autotransporter barrel domain-containing protein (Fragment) n=1 Tax=Pseudomonas sp. GM80 RepID=J3DYG0_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 24.6
  • Coverage: 338.0
  • Bit_score: 69
  • Evalue 6.10e-09
peptidase S8 similarity KEGG
DB: KEGG
  • Identity: 43.5
  • Coverage: 92.0
  • Bit_score: 60
  • Evalue 1.20e-06

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Taxonomy

Pseudomonas fluorescens → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1077
CAAAAGACTGTCTTAATGTCACTTGCCGCTTTAATGCTTACTTCCTCTTTAGGGCTAGCTTCTAGAAACTTAAGCGAAGAAGATCAAATAATGCTTATTAATGCTCAACACCTTCATGCTTCTGTAGAAGGTAAAAATATCAAAGCAGGCATTATTGATGGTTTCTTTGATCCTCACAGTGATACACAAGCTGTTCTTTCACATGTAACTAAGGATGCCTATCAAGGACAAAATCCAAGACAGGTTGTCTATAATGCTCAAAATTATGGTCATGATCATGCGAACCATGTTGCCAGTAGTATTCATAATATGGCTCCCCGGACAGAACTGCGAGTTATTGATGTCAATAATGATCCTAGTGTATTGCATGCAGGGCAGGGGAATGCTCGTCTTATTGCAGCTTTAGATGAAGCAATAAGAGCAAAGTTAGACTTTGTAAATATTTCACTTAGGATTGCCCCAGATCGTGATTGGAATGGTGCTATTTCTCAAGATGTAAAAGCAGCTTTCTTAAGAGCAAGAGATGCTGGAGTTGGAATTATTAAGAGTGCTGGAAATGATCAAGAGTTTACAGGAACTTCAGCTTACACGCTTAGTTTAGTTGAACTGCTTGAAGAAATGAGAGGATCTATGATCCTAGCAGCAGCTACAGAGTATAATTCTGATGGGCAGCATGAGAAGCTTGCAAGTTTTTCAAAGGGCAAGATGAACTTTCAAACTGGTAAAACAAAATTAGACCGGCATGGTAATCTTATTCTTACAAGAGGAAGTAACCTCGCAGGCCTTGCTCATGATTATACAATAACAACGCCTGGCAAGAAAAACTATGCCTTTGGAGCTGGCAATGTCAGAATGATCATGAGTGGTACATCTATGGCAGCGCCAATTGCAACAGGAGCTGCCTGCTTGATCAAGAGCGCCCATCCTAGATTATCCTCAAAAGACGTGCTAGATTATATTTTGAGATCAGCTCGCACAAAGAGTTTTCAAGGTAACCTTGACCTTCCTGTAGGAAAGTATGGCAGAGGGATCTTGGATGTTAACCAAGCTCTTACAATGATAAAAAAAGATAGCTAG
PROTEIN sequence
Length: 359
QKTVLMSLAALMLTSSLGLASRNLSEEDQIMLINAQHLHASVEGKNIKAGIIDGFFDPHSDTQAVLSHVTKDAYQGQNPRQVVYNAQNYGHDHANHVASSIHNMAPRTELRVIDVNNDPSVLHAGQGNARLIAALDEAIRAKLDFVNISLRIAPDRDWNGAISQDVKAAFLRARDAGVGIIKSAGNDQEFTGTSAYTLSLVELLEEMRGSMILAAATEYNSDGQHEKLASFSKGKMNFQTGKTKLDRHGNLILTRGSNLAGLAHDYTITTPGKKNYAFGAGNVRMIMSGTSMAAPIATGAACLIKSAHPRLSSKDVLDYILRSARTKSFQGNLDLPVGKYGRGILDVNQALTMIKKDS*