ggKbase home page

SCNpilot_expt_500_bf_scaffold_21932_3

Organism: SCNPILOT_EXPT_750_P_Alphaproteobacteria_36_9_partial

partial RP 28 / 55 MC: 1 BSCG 28 / 51 MC: 2 ASCG 7 / 38
Location: 1560..2447

Top 3 Functional Annotations

Value Algorithm Source
Putative permease of the drug/metabolite transporter superfamily n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AZ39_AZOBR similarity UNIREF
DB: UNIREF100
  • Identity: 38.6
  • Coverage: 277.0
  • Bit_score: 198
  • Evalue 9.40e-48
Uncharacterized protein {ECO:0000313|EMBL:AIL13338.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.7
  • Coverage: 281.0
  • Bit_score: 427
  • Evalue 1.70e-116
putative permease of the drug/metabolite transporter superfamily similarity KEGG
DB: KEGG
  • Identity: 38.6
  • Coverage: 277.0
  • Bit_score: 198
  • Evalue 3.00e-48

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 888
ATGGTTGCAGCCCAATCTTGTTTCGGTATGGTAAGGCGCAAGGAGTATAATAACCGTCAAGGTGCATTAAATATGCTCGTAGCGGTGTTTACTTTTTGTTTAGTGAATGCCGTTGCAAAAGACACAATTGCTCAATATCCTCCTTTAGAAGTTTTATTTTTTCGTTTTGCTGGAGCTTTGATTCCAGCATGGTTTCTTTTAAAGCAAGATCAAGGAACCTTTCCTTCTGCTAATCATCCTTATGGGATATACTTGTTAGCATCAGCCATCTTAATCATAGATCTTTTTTGTCTTTTTATGTCTTTCAAATATTTACCCTTAGCTGATGCAACAGCACTTTCTTTTTCTTCAATCTTTTTTATCACTGTTCTTGCAGCAATTTTTCTTAAAGAACCTCTTTCTCTCTCAAGACTAGGAATCATTATTGTTGGCTTTATCGGCGTCATCATTATCGCAAGGCCAACCGGCAATATTTCCATCTTAGGTGCAACATTTTCACTTATATATGCTTTGTCAGATGCGATAGTTTTATTACTCATTCGCGTTTTAACACGTACACATAAAAGCAGTATGATTCTCTTTTCATTCTCTTCTTTAGCAACTTTAATAACGGCGAGCTTTCTGCCTTTTATATGGAAAACGCCTTCTTTTATTGACTTAGGTAAATTTCTTTTTTTAGGAATTGGCGGTGGCCTAGGACAGTTTTTTATTACCCAAGCTTATAAACTTGCGCCCGCAAGCATTGTTGCACCCATGGTTTATTTTGCGACCTTATGGAGTGCTTTACTCGGTTTTATGTTCTGGGGAGAAATCCCTGGAATGCATTTTTGGATAGGAAGTGCCTTTGTTATTATATCTGGTCTTTACATTATATGGCATGAATCCTAG
PROTEIN sequence
Length: 296
MVAAQSCFGMVRRKEYNNRQGALNMLVAVFTFCLVNAVAKDTIAQYPPLEVLFFRFAGALIPAWFLLKQDQGTFPSANHPYGIYLLASAILIIDLFCLFMSFKYLPLADATALSFSSIFFITVLAAIFLKEPLSLSRLGIIIVGFIGVIIIARPTGNISILGATFSLIYALSDAIVLLLIRVLTRTHKSSMILFSFSSLATLITASFLPFIWKTPSFIDLGKFLFLGIGGGLGQFFITQAYKLAPASIVAPMVYFATLWSALLGFMFWGEIPGMHFWIGSAFVIISGLYIIWHES*