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SCNpilot_expt_500_bf_scaffold_24008_1

Organism: SCNPILOT_EXPT_750_P_Alphaproteobacteria_36_9_partial

partial RP 28 / 55 MC: 1 BSCG 28 / 51 MC: 2 ASCG 7 / 38
Location: comp(2..418)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.9
  • Coverage: 139.0
  • Bit_score: 205
  • Evalue 5.10e-50
rluD; pseudouridine synthase; K06179 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] similarity KEGG
DB: KEGG
  • Identity: 38.1
  • Coverage: 147.0
  • Bit_score: 101
  • Evalue 1.80e-19
hypothetical protein n=1 Tax=Kordiimonas gwangyangensis RepID=UPI00036E2E3F similarity UNIREF
DB: UNIREF100
  • Identity: 37.9
  • Coverage: 145.0
  • Bit_score: 103
  • Evalue 1.50e-19

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Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 417
ATGGCGATTCAAAAAGTAATAATTTCTAAAAATGATGCAGGGATAAAGTTATTAAGTTGGTTAAAGAATTACTACCAAGGTATGCCCTTTAATCAATTACAGAAATGGTTAAGAACTGGACAAATTCGTGTTAATGGAAAACGGGTGAAAGGAAGTGAGATCTTAGTTTTGAGCCAAGAACTTAGATTACCTTCTTACACTTCGGATTTTAAGAGAAATAATTTCCTAAAAAAGCATGAGCCAAAACCTGAGAGGTTAAAACAAGTACAAGAAGCCATTATTTATCAAAATGAGCGTTGGATCGTTCTTAATAAGCCACAAGGACTTGCAACACAAGGTGGAACAGGAATTAAAGAAAGCGTTGATCAACTCATGGAAATCCTATTTACGCCTTCACCTAAGCTTACCCATCGCCTT
PROTEIN sequence
Length: 139
MAIQKVIISKNDAGIKLLSWLKNYYQGMPFNQLQKWLRTGQIRVNGKRVKGSEILVLSQELRLPSYTSDFKRNNFLKKHEPKPERLKQVQEAIIYQNERWIVLNKPQGLATQGGTGIKESVDQLMEILFTPSPKLTHRL