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SCNpilot_expt_500_bf_scaffold_21798_2

Organism: SCNPILOT_EXPT_750_P_Alphaproteobacteria_36_9_partial

partial RP 28 / 55 MC: 1 BSCG 28 / 51 MC: 2 ASCG 7 / 38
Location: 963..1628

Top 3 Functional Annotations

Value Algorithm Source
conjugal transfer protein TraA n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225B50A similarity UNIREF
DB: UNIREF100
  • Identity: 55.0
  • Coverage: 218.0
  • Bit_score: 253
  • Evalue 2.40e-64
Uncharacterized protein {ECO:0000313|EMBL:AIL13481.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.1
  • Coverage: 222.0
  • Bit_score: 390
  • Evalue 1.40e-105
conjugal transfer relaxase TraA similarity KEGG
DB: KEGG
  • Identity: 40.2
  • Coverage: 219.0
  • Bit_score: 133
  • Evalue 6.70e-29

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Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 666
ATGCATGAAGTCCAGCATGTGGAGTTATTGCTTCCTCAGGATGCACCAGAATGGGCAAAGGAGTTAAAAAATCTTATAGCAGTTGATCGCCAAAAAGGAGTGCAGAAGTTTTCTGATATTGTGGAGGAGCACGAGAAGAGAAAAGATGCTCAAGTCTATCGAGAATATGAGTTTGCTCTCCCTCGTGAATTTACAGATGAACAATGTATAAAACTTGCAAATGAGTTTATTCAAGATCAGATGTGTGGCCAAGGAATGGCTGTGCTTGCTAACTTTCATCTTGATCATGATGAAGACACAGGAGAAAGGAAACCTCACTGCCATGCTCTAATGCTAACACGAAGACTTACAGAAAAAGGACTGCATTCAAAAAAAGAAACTGATTGGAATCGAAGAAGTTTAGGAGCGGAATTAAGAGAACAATTTGTGGCTTACACAAATTTTCATCTTAAGATGCATGGTTTTGATAAAAGGCTGGATCACAGGTCTTATGCTGAAAGAGGGATTGAAATTGAGCCTCAGCCGAAACGAGGCACAAACATCAAGGATATGGAATTTAGAGTTGGAAACAATCCAAAAGATCTTTTCTCAGCAGCAAGTTCAGAAAAAGCCATTGCCTTTCGAGAAACAAAACTTAGGAATGTTTGCCGTATCATTAGAAAGCCG
PROTEIN sequence
Length: 222
MHEVQHVELLLPQDAPEWAKELKNLIAVDRQKGVQKFSDIVEEHEKRKDAQVYREYEFALPREFTDEQCIKLANEFIQDQMCGQGMAVLANFHLDHDEDTGERKPHCHALMLTRRLTEKGLHSKKETDWNRRSLGAELREQFVAYTNFHLKMHGFDKRLDHRSYAERGIEIEPQPKRGTNIKDMEFRVGNNPKDLFSAASSEKAIAFRETKLRNVCRIIRKP