ggKbase home page

SCNpilot_expt_500_bf_scaffold_26291_1

Organism: SCNPILOT_EXPT_750_P_Alphaproteobacteria_36_9_partial

partial RP 28 / 55 MC: 1 BSCG 28 / 51 MC: 2 ASCG 7 / 38
Location: 2..685

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein {ECO:0000313|EMBL:AIL13531.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.9
  • Coverage: 227.0
  • Bit_score: 344
  • Evalue 8.80e-92
Permease YjgP/YjgQ family protein id=3959753 bin=GWC2_Alphaproteobacteria_42_16 species=Caenispirillum salinarum genus=Caenispirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + similarity UNIREF
DB: UNIREF100
  • Identity: 34.8
  • Coverage: 227.0
  • Bit_score: 162
  • Evalue 4.40e-37
permease YjgP; K11720 lipopolysaccharide export system permease protein similarity KEGG
DB: KEGG
  • Identity: 32.9
  • Coverage: 225.0
  • Bit_score: 157
  • Evalue 4.50e-36

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 684
GACTATTATTTCCATGGCAAGAAAGAAAGCTTAACAGTTTCAGAGACAGGTTTATGGATAAGGGAAATACAAAAGAACCAACATTTCATTTTTCATATTAAAAATATCAATTCGGAGAAAAACTTATTAAATGAAATTATGATTAACATCTATGATCAAAAAAATCATTTTATTGAAAGTATAAGTTCTTCTTCTGGAATCTTACATGATGGTGTCCTTTCTATGCAAAATGTTTGGAAAATTTCTCCTGAGAAATTGCCACAAAAATATGAAAGTTATAATTTTCCAACAAAAATTTCTTTTGAAACGCTTAATAATACGGGCGCCACGCCGACAATTGTTTCCTTTTGGGACTTACCAACCACAGCTCGTCTTTTAGAAGCATCTGGAATTTCTGGTCTTAAGTATATGCTGTATTGGCATTCTTTATTATCTCGTTGGGGGTGGTTAGGAGCAATGGTTGTGCTGGCAGCATCATGTTCTTTACGTCCTCTCCGCCAACAAGGGACTGTTTATTTGATTATAATTGGAGCTATTGTTGCATTTTTGTTATATTTTTTACGGGATATTACGTATACTCTAGGTCTTTCTGGTAAGCTTCCAATCGTGTTATCAGCGTGGCTTCCATTTGTTATTAGTATGATTATAGGCGTCACCCTTTTGCTTTATTCTGAGGAAGGATAA
PROTEIN sequence
Length: 228
DYYFHGKKESLTVSETGLWIREIQKNQHFIFHIKNINSEKNLLNEIMINIYDQKNHFIESISSSSGILHDGVLSMQNVWKISPEKLPQKYESYNFPTKISFETLNNTGATPTIVSFWDLPTTARLLEASGISGLKYMLYWHSLLSRWGWLGAMVVLAASCSLRPLRQQGTVYLIIIGAIVAFLLYFLRDITYTLGLSGKLPIVLSAWLPFVISMIIGVTLLLYSEEG*