ggKbase home page

SCNpilot_expt_500_bf_scaffold_26292_1

Organism: SCNPILOT_EXPT_750_P_Alphaproteobacteria_36_9_partial

partial RP 28 / 55 MC: 1 BSCG 28 / 51 MC: 2 ASCG 7 / 38
Location: comp(2..1363)

Top 3 Functional Annotations

Value Algorithm Source
Multidrug efflux transporter id=4908529 bin=GWC2_Alphaproteobacteria_42_16 species=Azospirillum lipoferum genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + similarity UNIREF
DB: UNIREF100
  • Identity: 48.9
  • Coverage: 454.0
  • Bit_score: 401
  • Evalue 1.10e-108
multidrug efflux transporter similarity KEGG
DB: KEGG
  • Identity: 42.8
  • Coverage: 463.0
  • Bit_score: 341
  • Evalue 5.70e-91
Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 48.9
  • Coverage: 454.0
  • Bit_score: 401
  • Evalue 1.60e-108

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Alphaproteobacteria_42_30 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1362
ACGCTTCTTGCTCTCGTCCTTGCAATTGGACTCGTCGTGGACGACGCAATTATCGTTTTGGAAAATATCTATCGACATATAGAAGATGGGATGCATCCTATAACAGCAGCCTTTAAAGGTGCCAAAGAAATTAGTTTCGCCGTCGTTGCAATGACGATCACACTTGCTGCTGTTTATGCACCAATTGCTTTATCAACAGGGCAAACTGGAAGACTATTTACTGAGTTTGCATTAACTTTAGCAGGTTCAGTTCTTATCTCCGGTTTTGTGGCATTAACTTTATCTCCTATGATGTGCAGTCGATTATTAACTTCTCACACATCCAACCCTACGCGCCATACGAATAATCTTTTTGCTAAATACTGGGATGTATTTGAAGTTAAAAGTGGTCAAGTCCTTGACTATATTGATGTTCTCTACGAAACATTCTTAAAAAAGGCTCTTGTAAAGAGATGGACTGTGTTAGGAATAGGATTAATTATTGCAAGCCTCGGATATTACATTTTTAGGGAAATGCCTTCCGAACTCATTCCAAGAGAAGATCAAGGTATTGTTAATGCGCGCGCTATTCCACCTTACGGGGCTAATATTGATTTTACAAACAAATATATGCTTCAGGTTGATAGTATTATGAAAGGGATTCCTGAAATGGAAAAAAGATTAACCTTGGTCAACGTACCAGGTGAATCAACCATCTTAGGTGTTTTATCGCCTTGGGAAAAAAGAAAACGTCGAAGTCAGGAAATTGTCGAAGGGTTACGAGATCCTATGTATGATGTTACAGGGTTAAGTGTCACGCCAAGCGTAGGTGGTAAATCTCTTGTTGGAGGTTTAACAGATACGCCGGTCGAAGTTGTAATTGAAACCACAAAAACTTACAAAGAACTTGTTGAAATGGCTGATGGTTTTATGAAAACATTGCATGGATTAGGTGCACTTCAAGATATTTATGCAGACTATGGTGCAGAAGGGCAAGAACTTGTTGTGACAGTCGACCGCGATAAAGCAGCCTCTTTAGGCATTGATGTTTCTACAATTGGAGAAAGCCTTGATACACTTATTAGTGGTCGTTCTCCAAGTAAATTTAAACGTGAAAATAAACTTTATAATGTTAAAGTCTGGCTAGAAGAAGATTATCGCCGTAGTGCAGATGATCTTTCTATGGTTTTCTTACGCGGTTCAAAAGATCGAAAAGAAACTATGGTCCCTTTATCAGAAATTGTAGAGATTTCTAAACGCTTAGCACCTACAGCTATCTCTCACTTCTCTGGATTAAGATCTGTTACGTTCAGTGCTAAACTACGTGATGGCTTTAGTCTTGGTAATACTTTACAGCTTATAAAAGAACAAGGTTACAAGATG
PROTEIN sequence
Length: 454
TLLALVLAIGLVVDDAIIVLENIYRHIEDGMHPITAAFKGAKEISFAVVAMTITLAAVYAPIALSTGQTGRLFTEFALTLAGSVLISGFVALTLSPMMCSRLLTSHTSNPTRHTNNLFAKYWDVFEVKSGQVLDYIDVLYETFLKKALVKRWTVLGIGLIIASLGYYIFREMPSELIPREDQGIVNARAIPPYGANIDFTNKYMLQVDSIMKGIPEMEKRLTLVNVPGESTILGVLSPWEKRKRRSQEIVEGLRDPMYDVTGLSVTPSVGGKSLVGGLTDTPVEVVIETTKTYKELVEMADGFMKTLHGLGALQDIYADYGAEGQELVVTVDRDKAASLGIDVSTIGESLDTLISGRSPSKFKRENKLYNVKVWLEEDYRRSADDLSMVFLRGSKDRKETMVPLSEIVEISKRLAPTAISHFSGLRSVTFSAKLRDGFSLGNTLQLIKEQGYKM