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SCNpilot_expt_500_bf_scaffold_26327_3

Organism: SCNPILOT_EXPT_750_P_Alphaproteobacteria_36_9_partial

partial RP 28 / 55 MC: 1 BSCG 28 / 51 MC: 2 ASCG 7 / 38
Location: comp(1754..2395)

Top 3 Functional Annotations

Value Algorithm Source
Cell shape-determining protein MreC n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6ITR0_RHOCS similarity UNIREF
DB: UNIREF100
  • Identity: 33.7
  • Coverage: 205.0
  • Bit_score: 126
  • Evalue 2.50e-26
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.2
  • Coverage: 211.0
  • Bit_score: 339
  • Evalue 2.60e-90
mreC; rod shape-determining protein MreC; K03570 rod shape-determining protein MreC similarity KEGG
DB: KEGG
  • Identity: 33.7
  • Coverage: 205.0
  • Bit_score: 126
  • Evalue 7.90e-27

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Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 642
TCTTATTTAAGAGTACGTCATAAAAATGTAAAACTAGAAACAAAGCTCAAACAAATGGAAGGATGGGCCTTGAAAGCTCATGCTTTAGATTTAGAAAATCAACAACTTCGTCAATTATTAAAAATAGCTCCTGATCCAAAACTCAATTATATTACAGTTCCGGTACTAGGTATTGTAGAAGCTCCTTATACCAAAACTATCGTGCTCGGAGCTGGTTTTAATAAGGGTATTAAATTACGTCAGCCTGTTGTAATAGGTCAGCACATTGTAGGCCGCATTGTGGAAGTTTCTGAACAAACTGCACGTGTTTTATTAATTCAAGATGTAAATTCCCATGTACCTGTTATTTTAGAAAGATCAAAGATACATGGAATTGCTTCAGGCGATAGTGATTCTTACTTAATTATCCGATTTTTTGAAATGGAAGCCAAAGCAGAGGTGGGTGAGCTTGTTTTCACATCAGGAATAGGAGGCATTTATCCTAAAGGTTATCTTATAGGACAAGTTACTTATCAAAAAGGTGAAATTGTTGGAATTAAAAGTCTTGTTCAACTAAATGACCTAGAATATGTTCATGTTTTTGTTGGGACAGAACTCCCTATGGAAAATATAAGGCCATTACATAATGGTAAAGGCACCTGA
PROTEIN sequence
Length: 214
SYLRVRHKNVKLETKLKQMEGWALKAHALDLENQQLRQLLKIAPDPKLNYITVPVLGIVEAPYTKTIVLGAGFNKGIKLRQPVVIGQHIVGRIVEVSEQTARVLLIQDVNSHVPVILERSKIHGIASGDSDSYLIIRFFEMEAKAEVGELVFTSGIGGIYPKGYLIGQVTYQKGEIVGIKSLVQLNDLEYVHVFVGTELPMENIRPLHNGKGT*