ggKbase home page

SCNpilot_expt_500_bf_scaffold_27758_2

Organism: SCNPILOT_EXPT_750_P_Alphaproteobacteria_36_9_partial

partial RP 28 / 55 MC: 1 BSCG 28 / 51 MC: 2 ASCG 7 / 38
Location: 387..2099

Top 3 Functional Annotations

Value Algorithm Source
Putative double-strand break repair protein, AddB-like protein (Fragment) n=1 Tax=Oceanibaculum indicum P24 RepID=K2IDM7_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 34.8
  • Coverage: 351.0
  • Bit_score: 180
  • Evalue 6.70e-42
Uncharacterized protein {ECO:0000313|EMBL:AIL13290.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.7
  • Coverage: 582.0
  • Bit_score: 712
  • Evalue 5.20e-202
double-strand break repair protein AddB similarity KEGG
DB: KEGG
  • Identity: 35.8
  • Coverage: 341.0
  • Bit_score: 177
  • Evalue 1.00e-41

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1713
ATGAATAAGCATCAAAAGCCCCTTAAATTTCAAGATGCGCCGCTAAAATACCTTGCATCTCTTTTGCAACAGATGTGTACAGAAGATCCTTTGCAACTTTCACAAGCAATTGTTTTGCTTCCTTCACGTCGAGCAAAGCGACAGTTTATTGAACAATTGCATCATTTGTCTTCTCAGGGCGCGTTTATTTTACCTCAAATTAGTACATTAAGGGATTGGGTGTTTCAAAAGAACGGTCCTTCTTCAACGTTGCCTAGTCCCGTCTCGTACTTCGAATGTGAATTACATTTTATAAATTTGTTGAAGTCCCATGTCCGAGAAGAGTCTCAAGCTATTCATTTTGCAGAATCTCTTACAGATTTATATGATGAGTTTATCCTTGCTGAAATTTCTTTAGAGAGAATTAATAAAATNNNAGAGTTTGCCATTCATTGGCAGGAGAATTTAAAGTATTTAGAGGTTCTGAAAAATGAATGGCCTATTCTGCTAAAGAAATTAGGTCGTAGTGACCCATGTGTTTATTTTAAGCATGTGTTACAGGCACAAATTGACGCTTGGAACTTGGCGCCTCCACAAACGGTTGTTATGGCTGCTGCACTTGATACGCATATTCCGATTGTAATGCGCTTGAACAATGTCATAGAATTGCTTCCTAAAGGAAAGGTATATTCAGATCATTCTTTTGAAGCGTCTGAAGAAACAATTATACCATTATTTTCAGAGAACTCAGAGAAGTTTACCCAAAAGCTAAAGTTAGGAGAGTTTTCTTCTCTTGAAGAAGAAGCTAGAGTTATTGCAATCTTAATGCGTGAACAACTTGAAAACCCTCATAAAACGGTAGCTCTTGTAACGCCTTCACGTTCTCTCGCTCAACGCGTGAATCTAGAGCTATCTCGTTGGGATCTTAATGCTGATGATTCATATGGTCAAAGTTTGTATGATGCACCATTGGGGACATTTTTAAGATTATCCTTAGAAGGTGTCCTAAAAGATTTTGAAAGCATGCCTCTTTTAAGTCTACTTAAGCATCCTTACACAGCTCAAACTTATAAAAAATATGTTGGCAAACTCGAGCTACAGTATTTGCGAGGAAAATTATTTGTAACAAACATATCCTATCTTTTGCATGATGTGCCAAGAGGGACTGAGATTCACACGTTTCTAAATGCTTTAAAGGAATGGTCCGTTCCTTTGAAAAATTTGCTTTCACAAAAATCTATTTTATTAATAGATTTACTTAGAGTTCATCTGGAATTTGTTGAAATTTTATCGCAAAATTCTCTTGGACAACAGAGAGGGCATCAAGAATTCATTGAACATTTTAAAGGGCTTGAGAAGTCTTTAACGAATTTCACTATTAAAGGTTCAGATTATCCATTTATTTTAAAAAAATTGCTCTCCCAAGTCGCATTTAGGCCCTCTTATGGAACGCATCCAAGACTTTCTATATGGGGTCCTTTAGAGGCTCAGCTGCAGACAGTTGATTGTATGATTATTGGAGGAATGAATGAGAAAAATTGGCCTGGCCACTATCTTCAAAGTTCTTGGTTAAATGATCATATGCGGGGTATTCTAGGCCTTCAAACAAGAATGACATGGTATCAAACAAAAAAGCGTTTATGGTGTGACCTTTTAAAAGCACCTGAAATCATCTTAACAAGAGCAATCCGTGAGGATGGACAACTTGAGGCCACTTCAAGATGGTGGTTGGCT
PROTEIN sequence
Length: 571
MNKHQKPLKFQDAPLKYLASLLQQMCTEDPLQLSQAIVLLPSRRAKRQFIEQLHHLSSQGAFILPQISTLRDWVFQKNGPSSTLPSPVSYFECELHFINLLKSHVREESQAIHFAESLTDLYDEFILAEISLERINKXXEFAIHWQENLKYLEVLKNEWPILLKKLGRSDPCVYFKHVLQAQIDAWNLAPPQTVVMAAALDTHIPIVMRLNNVIELLPKGKVYSDHSFEASEETIIPLFSENSEKFTQKLKLGEFSSLEEEARVIAILMREQLENPHKTVALVTPSRSLAQRVNLELSRWDLNADDSYGQSLYDAPLGTFLRLSLEGVLKDFESMPLLSLLKHPYTAQTYKKYVGKLELQYLRGKLFVTNISYLLHDVPRGTEIHTFLNALKEWSVPLKNLLSQKSILLIDLLRVHLEFVEILSQNSLGQQRGHQEFIEHFKGLEKSLTNFTIKGSDYPFILKKLLSQVAFRPSYGTHPRLSIWGPLEAQLQTVDCMIIGGMNEKNWPGHYLQSSWLNDHMRGILGLQTRMTWYQTKKRLWCDLLKAPEIILTRAIREDGQLEATSRWWLA