ggKbase home page

SCNpilot_expt_500_bf_scaffold_29570_3

Organism: SCNPILOT_EXPT_750_P_Alphaproteobacteria_36_9_partial

partial RP 28 / 55 MC: 1 BSCG 28 / 51 MC: 2 ASCG 7 / 38
Location: 889..1212

Top 3 Functional Annotations

Value Algorithm Source
Transposase, IS4 family protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WFN1_9SYNE similarity UNIREF
DB: UNIREF100
  • Identity: 45.2
  • Coverage: 104.0
  • Bit_score: 93
  • Evalue 1.60e-16
Uncharacterized protein {ECO:0000313|EMBL:AIL12670.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.5
  • Coverage: 108.0
  • Bit_score: 197
  • Evalue 8.20e-48
transposase similarity KEGG
DB: KEGG
  • Identity: 45.2
  • Coverage: 104.0
  • Bit_score: 87
  • Evalue 2.70e-15

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 324
ATGGGAATAGATTATGATACTTTATTTTGGTTTGTCGACGATTTTTGTAAAGGCTTTGAGCCTTGGTATAAGAAGCAATTGATATCTGGTCATATGATAAGTCGCCGCAGAGATGGCCATCTAACATTATCCGAAGTTCTGACAATCTTAATTGCGTACCATCAATCGGGGATGTCTTGCTTTAAATACTTTTATCTGAATTTATGCTCTTACCATCGCCATTTATTCCCCAAGCTTGTCCATTATGCGCGTTTTGTCAAACTCATCAAGCAAGCTTTTCCAGCCCTTATTTGTTTACTTAAAAGCCTAGCAGGAGAGATCACA
PROTEIN sequence
Length: 108
MGIDYDTLFWFVDDFCKGFEPWYKKQLISGHMISRRRDGHLTLSEVLTILIAYHQSGMSCFKYFYLNLCSYHRHLFPKLVHYARFVKLIKQAFPALICLLKSLAGEIT