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SCNpilot_expt_500_bf_scaffold_32465_1

Organism: SCNPILOT_EXPT_750_P_Alphaproteobacteria_36_9_partial

partial RP 28 / 55 MC: 1 BSCG 28 / 51 MC: 2 ASCG 7 / 38
Location: 1..312

Top 3 Functional Annotations

Value Algorithm Source
RNA methyltransferase; K03215 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] similarity KEGG
DB: KEGG
  • Identity: 51.5
  • Coverage: 99.0
  • Bit_score: 112
  • Evalue 9.80e-23
RNA methyltransferase n=1 Tax=Bartonella grahamii (strain as4aup) RepID=C6AC83_BARGA similarity UNIREF
DB: UNIREF100
  • Identity: 51.5
  • Coverage: 99.0
  • Bit_score: 112
  • Evalue 3.10e-22
Uncharacterized protein {ECO:0000313|EMBL:AIL12383.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.8
  • Coverage: 103.0
  • Bit_score: 160
  • Evalue 1.10e-36

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Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 312
TGCGCAAAAATTCAGAAGCTGGCGATACAGACTTATACACGAAATTTATTTTCTAACCCTGTAACTATAGAGAAACTTGAATCTTATCAAAGTGTTATTATGAATCCTCCGCGTCAAGGTGCCGCTGCACAAGTAAAGATGCTTGCTCTGAGTAATGTATCGCATGTCGTAATGGTGTCTTGTAATCCTGATACGTTTGCAAGAGATGTCGCTCTTTTGCAAAAGGGAGGCTTCAAGATTCAAAAGCTAAGTCCTGTTGATCAATTTTTATGGTCACCTCATGTTGAAATTGTCACTCATTTAAGACGATGA
PROTEIN sequence
Length: 104
CAKIQKLAIQTYTRNLFSNPVTIEKLESYQSVIMNPPRQGAAAQVKMLALSNVSHVVMVSCNPDTFARDVALLQKGGFKIQKLSPVDQFLWSPHVEIVTHLRR*