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SCNpilot_expt_500_bf_scaffold_22064_2

Organism: SCNPILOT_CONT_300_BF_Flavobacteriales_36_9

partial RP 21 / 55 BSCG 18 / 51 ASCG 4 / 38
Location: comp(1273..1608)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Chryseobacterium sp. CF314 RepID=J2T0T4_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 70.6
  • Coverage: 109.0
  • Bit_score: 159
  • Evalue 2.40e-36
RNA polymerase subunit sigma24 {ECO:0000313|EMBL:KFC20707.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.6
  • Coverage: 111.0
  • Bit_score: 210
  • Evalue 9.70e-52
RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 53.3
  • Coverage: 105.0
  • Bit_score: 116
  • Evalue 4.30e-24

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Taxonomy

Epilithonimonas sp. FH1 → Epilithonimonas → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 336
CAGGTTTTTGATGCCTGGGCAAAGAAAATTGTGGTGAATCAATGTCTTCAGAAGCTTCGCAAGAAACAGCCGTTTTCAATTTCTATTGAAGAAAATTTTGTGGATTTACCAGATTCCGAAACAGAAAATGTTTCAGAAGAAAAAGGCATTTTATCTCTTCTTAATTTCCTTCCGGAAGGTTGCAGAACGATTTTCAATCTTTTTGCAATGGAAGGTTATCCTCACAAAGAAATTGCGCAAATGCTTTCTATCTCAGAAGGAACATCCAAATCTCAGGTGAATTTTGCTCGTAAGAAATTGCAGGAGCTTATGAAACTTCAAACAATTAATTCTTAA
PROTEIN sequence
Length: 112
QVFDAWAKKIVVNQCLQKLRKKQPFSISIEENFVDLPDSETENVSEEKGILSLLNFLPEGCRTIFNLFAMEGYPHKEIAQMLSISEGTSKSQVNFARKKLQELMKLQTINS*