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SCNpilot_expt_500_bf_scaffold_19727_4

Organism: SCNPILOT_CONT_300_BF_Flavobacteriales_36_9

partial RP 21 / 55 BSCG 18 / 51 ASCG 4 / 38
Location: comp(1875..2324)

Top 3 Functional Annotations

Value Algorithm Source
Small-conductance mechanosensitive channel n=1 Tax=Riemerella anatipestifer RA-CH-1 RepID=J9R677_RIEAN similarity UNIREF
DB: UNIREF100
  • Identity: 72.1
  • Coverage: 147.0
  • Bit_score: 220
  • Evalue 9.00e-55
Mechanosensitive ion channel protein MscS {ECO:0000313|EMBL:KFC22863.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.9
  • Coverage: 149.0
  • Bit_score: 262
  • Evalue 3.80e-67
Small-conductance mechanosensitive channel similarity KEGG
DB: KEGG
  • Identity: 72.1
  • Coverage: 147.0
  • Bit_score: 220
  • Evalue 2.80e-55

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Taxonomy

Epilithonimonas sp. FH1 → Epilithonimonas → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 450
ATGTCCGAAACCAATACGAGAAGAATCAAAAAATCCATTGTCTTTAATATCAAATCCTTCAAATTTTTGGATGATGAAGCTTTTGGGAAGTTGTTGAAAATCAACCTGATTCACGATTACCTTGTTGATAAGAAAAAAGAGATTGATTCTCAGAAAGGAGCACTTGAAAATTCTGAAGAAATTATCAACGGTCAACAATTGACCAATATCGGAACTTTCAGAATCTATGCTTTGAATTATCTTAAAAATAACCCGAACATCGATCAGGAAGGAACGATAATGGTGAGACAAATGGAGATCACGCCACAAGGAATGCCTTTGGAGATCTATTGTTTTGCCAATGATTCTAACTGGGTGAATTTTGAGCAGATTCAGGCAGATATTTTTGATCACCTTTTGGTAGCTTCTAAGGAATTTGACCTCGAGATAATGCAGGTTAATAAAATTTAA
PROTEIN sequence
Length: 150
MSETNTRRIKKSIVFNIKSFKFLDDEAFGKLLKINLIHDYLVDKKKEIDSQKGALENSEEIINGQQLTNIGTFRIYALNYLKNNPNIDQEGTIMVRQMEITPQGMPLEIYCFANDSNWVNFEQIQADIFDHLLVASKEFDLEIMQVNKI*