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SCNpilot_expt_500_bf_scaffold_30133_1

Organism: SCNPILOT_CONT_300_BF_Flavobacteriales_36_9

partial RP 21 / 55 BSCG 18 / 51 ASCG 4 / 38
Location: comp(1..1188)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.5
  • Coverage: 396.0
  • Bit_score: 757
  • Evalue 9.80e-216
DNA-directed RNA polymerase subunit beta n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CJ95_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 93.4
  • Coverage: 396.0
  • Bit_score: 750
  • Evalue 6.60e-214
DNA-directed RNA polymerase subunit beta similarity KEGG
DB: KEGG
  • Identity: 92.4
  • Coverage: 396.0
  • Bit_score: 742
  • Evalue 9.60e-212

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Taxonomy

Epilithonimonas lactis → Epilithonimonas → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1188
AAAGTTGTTCGTGAAGACTGGTTCACTTCTATTCACGTTGATGAATATTCTTTGGAAGTTCGTGATACCAAATTAGGTATGGAAGAATTGACAGCAGATATTCCGAACGTTTCTGAAGAAGCGACTAAAGATCTCGATGAGAACGGTATGATCCGTATCGGTGCAGAAGTGAAGCCTGGTGATATCCTTATCGGTAAAATCACACCTAAAGGTGAATCTGATCCAACGCCGGAAGAAAAATTACTTAGAGCGATCTTCGGGGACAAAGCTGGTGACGTAAAAGATGCTTCTCTTAAGGCAGATTCTTCTCTTAGAGGAGTTGTTATCAACAAAAAATTGTTCTCCAGAAACATCAAGGACAAAAAGAAAAGAAGCGAAGAAAAAATCAAGTTGGAGGAAATCGAAAATACTTACAAAAATAAGTTTGACGATTTAAGAAATACTTTGATTGACAAGTTGAATACTTTAGTTTCCGGTAAAACTTCTCAAGGTGTGAAAAACGATCTTGATGAAGAAGTAATCGGTAAAGGAACCAAGTTCACTTTGAAGTTGCTTCAGTCTGTTGAAGATTATGTAAACATCAGTGGTTCTGACTGGACTGTTGATGCTGACAAAAATGAATTGATCAAGCAGTTGATCCATAATTATAAGATTAAATACAACGATCTTTCGGGCGTTAAAAACCGTGAGAAGTTTGCATTATCTATCGGAGACGAGTTACCTGCAGGTATTATCAAATTAGCTAAAGTTTACATCGCTAAGAAACGTAAACTGAATGTTGGTGATAAAATGGCTGGTCGTCACGGTAACAAAGGTATCGTTTCAAGAATCGTTCGTGAAGAAGATATGCCGTTCCTTGAGGATGGAACACCGGTAGATATCGTACTGAATCCACTTGGGGTACCTTCTCGTATGAACATCGGGCAGATCTACGAAACTGTTCTTGGATGGGCTGGTAAGCAGTTAGGTTTGAAATTCGCTACACCAATCTTTGACGGTGCTAGCTTAGAACAAATCACTGAATATACAGACCAGGCAGGTCTTCCTAAATTCGGAAACACACACCTTTATGACGGTGGTACAGGTGAGAGATTTACTCAGCCTGCAACGGTTGGTGTGATCTATATGTTGAAGTTAGGACACATGGTAGATGATAAGATGCACGCACGTTCTATCGGACCTTACTCA
PROTEIN sequence
Length: 396
KVVREDWFTSIHVDEYSLEVRDTKLGMEELTADIPNVSEEATKDLDENGMIRIGAEVKPGDILIGKITPKGESDPTPEEKLLRAIFGDKAGDVKDASLKADSSLRGVVINKKLFSRNIKDKKKRSEEKIKLEEIENTYKNKFDDLRNTLIDKLNTLVSGKTSQGVKNDLDEEVIGKGTKFTLKLLQSVEDYVNISGSDWTVDADKNELIKQLIHNYKIKYNDLSGVKNREKFALSIGDELPAGIIKLAKVYIAKKRKLNVGDKMAGRHGNKGIVSRIVREEDMPFLEDGTPVDIVLNPLGVPSRMNIGQIYETVLGWAGKQLGLKFATPIFDGASLEQITEYTDQAGLPKFGNTHLYDGGTGERFTQPATVGVIYMLKLGHMVDDKMHARSIGPYS