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SCNpilot_expt_500_bf_scaffold_13411_2

Organism: SCNpilot_BF_INOC_Flavobacteriia_40_10

partial RP 13 / 55 MC: 1 BSCG 14 / 51 ASCG 4 / 38
Location: comp(1632..2471)

Top 3 Functional Annotations

Value Algorithm Source
RteC protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VYD9_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 96.1
  • Coverage: 279.0
  • Bit_score: 541
  • Evalue 5.60e-151
  • rbh
Tetracycline regulation of excision, RteC {ECO:0000313|EMBL:KGO11067.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (Chryseobacterium miricola).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.1
  • Coverage: 279.0
  • Bit_score: 541
  • Evalue 7.80e-151
RteC protein similarity KEGG
DB: KEGG
  • Identity: 64.4
  • Coverage: 281.0
  • Bit_score: 371
  • Evalue 2.40e-100

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Taxonomy

Elizabethkingia miricola → Elizabethkingia → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 840
ATGGCATCTTCATTAAATCATATCATATCGGAGATACAGCGAAAAGAAAATGCTATTTCGCTGTCTGCACCTAATGCAATTGATGAAGCATATCAAACGACGATATACCTGAAAGAATATTTATGGTCTATTAGAGAGGATGTTACGAAAAAAGGATTTAAAAACCAATGGGAGGAAATCAATTTCTTTCGCAACATTAAGCCATACATCCTCTCCAAACTCATTTACCACAATAAGATATTTCGCATACAGACCGCTTGTCCCGTTGATGGAGGGAAGATGTATGCGAATTATTTTTCAGAGCAATTAGGGGAATTAAAACAGGAATACAGGGAACACATTTATAATTCAGATTTTTACAGGTATTATCGTTCAGGAAGAACCGACCGTGATGAAATCTACTTTATGTTGGGTAACATCAATTTCCACGATGGTCTGAATAGTTTTGTCTTTGAAATTGACCCATTGTTTTCAACTTATTATGATAACAAAGTGGCTCGGATAATAGCCAACGAACTACTCTATACCTACATTCTCCAAAAAATAAATGATGATGAAATGGCAGATTTCTCTGTGAGGGATATATCTGATAGCATCCTTTGGACGGATACCAAAAATGCCTTGATAGAACTGATTTATGCTCTTTACGCAAATAGCTCTCTTTCTAATGGTAAAATAGGAATACGTAAAATCAGTTTGGCTTTAGAAAGAATGTTTCAGATTTCTTTAGGAGATTTGCATCATTCTTTCCATCGAATGAAATATCGTGCCGGTTCCCGAACTGCATTTTTAGACCAATTGAAATCTTCTTTGGAAGAATATATGGACAAAGATTTGTAA
PROTEIN sequence
Length: 280
MASSLNHIISEIQRKENAISLSAPNAIDEAYQTTIYLKEYLWSIREDVTKKGFKNQWEEINFFRNIKPYILSKLIYHNKIFRIQTACPVDGGKMYANYFSEQLGELKQEYREHIYNSDFYRYYRSGRTDRDEIYFMLGNINFHDGLNSFVFEIDPLFSTYYDNKVARIIANELLYTYILQKINDDEMADFSVRDISDSILWTDTKNALIELIYALYANSSLSNGKIGIRKISLALERMFQISLGDLHHSFHRMKYRAGSRTAFLDQLKSSLEEYMDKDL*