ggKbase home page

SCNpilot_expt_500_bf_scaffold_16642_1

Organism: SCNpilot_BF_INOC_Flavobacteriia_40_10

partial RP 13 / 55 MC: 1 BSCG 14 / 51 ASCG 4 / 38
Location: comp(3..170)

Top 3 Functional Annotations

Value Algorithm Source
RagB/SusD domain protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FBI4_FLAJ1 similarity UNIREF
DB: UNIREF100
  • Identity: 67.9
  • Coverage: 56.0
  • Bit_score: 80
  • Evalue 5.40e-13
RagB/SusD domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 67.9
  • Coverage: 56.0
  • Bit_score: 80
  • Evalue 1.70e-13
RagB/SusD domain protein {ECO:0000313|EMBL:ABQ07437.1}; Flags: Precursor;; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101); (Cytophaga johnsonae).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.9
  • Coverage: 56.0
  • Bit_score: 80
  • Evalue 7.60e-13

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Flavobacterium johnsoniae → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 168
ATGAAAAATATTAAAATAGCATTATTCTCATTATTCGCTCTATTTGCAACTAGCAGCTGTAATGACGATTTCCTAGACAGAACGCAGCCGGATACCATCAATACAGGTAATTATCCTAAAACTGCTGAAGAATTAGCGACCATTGTTAACGGGGCTTATCAGCCGCTG
PROTEIN sequence
Length: 56
MKNIKIALFSLFALFATSSCNDDFLDRTQPDTINTGNYPKTAEELATIVNGAYQPL