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SCNpilot_expt_500_bf_scaffold_17583_1

Organism: SCNpilot_BF_INOC_Flavobacteriia_40_10

partial RP 13 / 55 MC: 1 BSCG 14 / 51 ASCG 4 / 38
Location: 1..747

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=558152 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium piperi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.4
  • Coverage: 247.0
  • Bit_score: 433
  • Evalue 1.60e-118
S-adenosyl-methyltransferase mraW (EC:2.1.1.-); K03438 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] similarity KEGG
DB: KEGG
  • Identity: 86.2
  • Coverage: 247.0
  • Bit_score: 428
  • Evalue 1.50e-117
  • rbh
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VUG4_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 84.6
  • Coverage: 247.0
  • Bit_score: 432
  • Evalue 2.50e-118
  • rbh

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Taxonomy

Chryseobacterium piperi → Chryseobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 747
TTTGACCAGGATTTGGATGCACTCAATAATACCATTGATGACGACCGCTTTACGCTCATCAACCAAAACTTCAGGTTTCTGGAAAATTCCTTATTGATGTACGGCGTAACCGCTGTGGACGGAGTTTTGGCAGATTTAGGCGTTTCTTCCCATCAGTTTGACGAGGCCGAACGCGGATTCTCTACCAGAAGCAATGCCCCGCTCGATATGCGGCTGAATGTAATGCAGGGGCTTGATGCCAAAAAAGTAATCAACGATTTTGAAGAAGAACATTTGGCCGATATTTTCTACCATTATGGTGAAATTCGTGAGGCACGTAAGCTGGCAAGAGAAATTGTTCATCACCGAAAAACCAAAACTATTGAAACCACAGAGGACCTGAAGAAACTCTTCAGCTACATCCCTCCTCATAAGCAAAATAAATTTTTTGCACAGGTTTTTCAGGCCGTTCGTATTGAGGTGAATCAGGAGTTGGATGCTTTGAAAGAAATGTTGCTTCAATCTTACAAAATATTAAAACCTAATGGTCGACTGGTGGTAATTTCTTATCACTCATTAGAAGACCGGCTGGTTAAAAGATTTCTAAAAAACGGCATGTTTGAAGGAGAGCCGCCAAGAGATATCTACGGAAATTACGCAAAAACTTTTGAGCTCCTTCAAACCAAAGCAGTCAGCCCTGATACTGCGGAAATTGAGGAAAATTCCAGGGCTCGAAGTGCAAAGCTGAGAACTGGAATCAAGAAGTAA
PROTEIN sequence
Length: 249
FDQDLDALNNTIDDDRFTLINQNFRFLENSLLMYGVTAVDGVLADLGVSSHQFDEAERGFSTRSNAPLDMRLNVMQGLDAKKVINDFEEEHLADIFYHYGEIREARKLAREIVHHRKTKTIETTEDLKKLFSYIPPHKQNKFFAQVFQAVRIEVNQELDALKEMLLQSYKILKPNGRLVVISYHSLEDRLVKRFLKNGMFEGEPPRDIYGNYAKTFELLQTKAVSPDTAEIEENSRARSAKLRTGIKK*