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SCNpilot_BF_INOC_Flavobacteriia_40_10

SCNPILOT_EXPT_500_BF_STEP10_Chryseobacterium_39_3
In projects: SCNPILOT_EXPT_500_BF_STEP10

Consensus taxonomy: Chryseobacterium  →  Flavobacteriales  →  Flavobacteriia  →  Bacteroidetes  →  Bacteria

Metagenomic Context

Parent: SCNpilot_expt_500_bf_step10_UNK

Properties

Avg. coverage: 3.29 Longest contig: 6.10 Kbp Bin length: 799.90 Kbp GC content: 38.74 %
Contigs count: 457 Features count: 1088 rRNAs count: 0 tRNAs count: 0

Genome completeness

partial RP 13 / 55 MC: 1 BSCG 14 / 51 ASCG 4 / 38
Displaying items 201-250 of 457 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCNpilot_expt_500_bf_scaffold_21689
Species: Chryseobacterium jeonii (50%)
2 1636 bp 37.71 3.06 92.05
SCNpilot_expt_500_bf_scaffold_28642
Species: Chryseobacterium sp. P1-3 (50%)
2 1255 bp 38.17 2.99 71.71
SCNpilot_expt_500_bf_scaffold_22659
Species: Chryseobacterium taiwanense (50%)
2 1570 bp 39.43 3.50 84.08
SCNpilot_expt_500_bf_scaffold_19732
Species: Elizabethkingia anophelis (100%)
2 1788 bp 41.50 4.19 100.50
SCNpilot_expt_500_bf_scaffold_28132
Species: Chryseobacterium taiwanense (100%)
2 1279 bp 39.95 3.91 93.59
SCNpilot_expt_500_bf_scaffold_24669
Species: Epilithonimonas sp. FH1 (50%)
2 1450 bp 37.72 3.10 94.76
SCNpilot_expt_500_bf_scaffold_12455
Species: Flavobacteriaceae bacterium 3519-10 (100%)
2 2789 bp 42.17 3.50 98.85
SCNpilot_expt_500_bf_scaffold_17544
Species: Chryseobacterium sp. JM1 (50%)
2 2008 bp 42.88 3.11 82.47
SCNpilot_expt_500_bf_scaffold_29505
Species: Elizabethkingia anophelis (50%)
2 1217 bp 33.94 4.72 78.64
SCNpilot_expt_500_bf_scaffold_28394
Species: Chryseobacterium piperi (50%)
2 1266 bp 41.86 3.75 99.53
SCNpilot_expt_500_bf_scaffold_27043
Species: Chryseobacterium gleum (50%)
2 1857 bp 32.26 3.23 92.41
SCNpilot_expt_500_bf_scaffold_16363
Species: Chryseobacterium jeonii (100%)
2 2156 bp 40.63 2.90 95.59
SCNpilot_expt_500_bf_scaffold_25854
Species: Chryseobacterium luteum (50%)
2 1384 bp 42.41 3.43 99.49
SCNpilot_expt_500_bf_scaffold_28143
Species: Chryseobacterium jeonii (50%)
2 1279 bp 41.52 1.76 99.92
SCNpilot_expt_500_bf_scaffold_28655
Species: Chryseobacterium antarcticum (50%)
2 1255 bp 41.59 3.19 95.14
SCNpilot_expt_500_bf_scaffold_24935
Species: Flavobacterium indicum (50%)
2 1435 bp 35.33 2.79 84.67
SCNpilot_expt_500_bf_scaffold_33775
Species: Flavobacterium sp. EM1308 (50%)
2 1005 bp 34.13 3.98 99.10
SCNpilot_expt_500_bf_scaffold_16367
Species: Chryseobacterium jeonii (50%)
2 2155 bp 43.39 3.36 89.79
SCNpilot_expt_500_bf_scaffold_24680 2 1450 bp 28.62 2.41 67.03
SCNpilot_expt_500_bf_scaffold_19488
Species: Chryseobacterium jeonii (50%)
2 2363 bp 39.86 3.39 85.06
SCNpilot_expt_500_bf_scaffold_28657
Species: Chryseobacterium jeonii (50%)
2 1255 bp 45.90 2.19 95.14
SCNpilot_expt_500_bf_scaffold_28146
Species: Chryseobacterium antarcticum (50%)
2 1279 bp 39.33 3.32 90.30
SCNpilot_expt_500_bf_scaffold_21963
Species: RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated (50%)
2 1616 bp 36.26 2.94 97.46
SCNpilot_expt_500_bf_scaffold_27309
Species: Chryseobacterium soli (50%)
2 1317 bp 38.50 3.23 83.83
SCNpilot_expt_500_bf_scaffold_32893
Species: Chryseobacterium jeonii (50%)
2 1646 bp 40.52 3.80 92.77
SCNpilot_expt_500_bf_scaffold_22933
Species: Chryseobacterium jeonii (100%)
2 1552 bp 40.34 3.22 93.36
SCNpilot_expt_500_bf_scaffold_31256
Species: Chryseobacterium jeonii (50%)
2 1135 bp 39.47 2.42 98.33
SCNpilot_expt_500_bf_scaffold_30764
Species: Chryseobacterium jeonii (50%)
2 1157 bp 44.17 2.81 95.68
SCNpilot_expt_500_bf_scaffold_29526
Species: Chryseobacterium sp. P1-3 (50%)
2 1216 bp 41.61 2.06 99.18
SCNpilot_expt_500_bf_scaffold_27063
Species: Chryseobacterium jeonii (50%)
2 1328 bp 38.86 2.82 90.36
SCNpilot_expt_500_bf_scaffold_33537
Species: Flavobacteriaceae bacterium 3519-10 (50%)
2 1016 bp 42.32 3.94 99.80
SCNpilot_expt_500_bf_scaffold_16642
Species: Flavobacterium johnsoniae (100%)
2 2119 bp 39.26 3.07 99.24
SCNpilot_expt_500_bf_scaffold_28421 2 1265 bp 36.28 3.75 90.12
SCNpilot_expt_500_bf_scaffold_22949
Species: Sphingobacterium paucimobilis (50%)
2 1550 bp 36.97 3.23 76.84
SCNpilot_expt_500_bf_scaffold_42957
Species: Bergeyella zoohelcum (50%)
2 1205 bp 39.17 2.90 70.71
SCNpilot_expt_500_bf_scaffold_25879
Species: Pedobacter sp. BAL39 (100%)
2 1383 bp 38.03 3.07 99.35
SCNpilot_expt_500_bf_scaffold_31272
Species: Chryseobacterium solincola (50%)
2 1134 bp 39.24 2.43 78.31
SCNpilot_expt_500_bf_scaffold_25624
Species: Bergeyella zoohelcum (50%)
2 1396 bp 38.90 4.12 93.91
SCNpilot_expt_500_bf_scaffold_26753
Species: Chryseobacterium gleum (100%)
2 1342 bp 39.05 3.73 93.00
SCNpilot_expt_500_bf_scaffold_33801
Species: Chryseobacterium taiwanense (50%)
2 1004 bp 36.65 2.74 54.38
SCNpilot_expt_500_bf_scaffold_27587
Species: Geomicrobium sp. JCM 19038 (50%)
2 1305 bp 32.87 3.07 99.54
SCNpilot_expt_500_bf_scaffold_28176
Species: Flavobacteriaceae bacterium 3519-10 (50%)
2 1277 bp 39.86 2.74 71.42
SCNpilot_expt_500_bf_scaffold_25888
Species: Flavobacteriaceae bacterium 3519-10 (50%)
2 1382 bp 38.57 2.53 91.17
SCNpilot_expt_500_bf_scaffold_28178
Species: Chryseobacterium jeonii (50%)
2 1277 bp 41.27 2.55 99.61
SCNpilot_expt_500_bf_scaffold_41503
Species: Epilithonimonas sp. FH1 (50%)
2 1528 bp 30.37 2.95 69.11
SCNpilot_expt_500_bf_scaffold_26508
Species: Chryseobacterium antarcticum (50%)
2 1354 bp 38.26 2.77 84.20
SCNpilot_expt_500_bf_scaffold_14868
Species: BJP_IG2102_Flavobacteriales_34_12 (50%)
2 2370 bp 35.27 4.54 92.91
SCNpilot_expt_500_bf_scaffold_30279
Species: Chryseobacterium indologenes (50%)
2 1182 bp 39.09 4.23 99.24
SCNpilot_expt_500_bf_scaffold_26007
Species: BJP_IG2102_Bacteroidetes_40_9 (50%)
2 1376 bp 37.86 3.09 100.07
SCNpilot_expt_500_bf_scaffold_32936
Species: Chryseobacterium jeonii (50%)
2 1046 bp 38.34 2.87 94.65
Displaying items 201-250 of 457 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.