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SCNpilot_expt_500_bf_scaffold_30291_1

Organism: SCNPILOT_CONT_300_BF_Mesorhizobium_65_39

partial RP 1 / 55 BSCG 2 / 51 ASCG 1 / 38
Location: comp(2..337)

Top 3 Functional Annotations

Value Algorithm Source
Sugar ABC transporter, periplasmic binding protein (Y4oP) n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NRH1_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 51.0
  • Coverage: 96.0
  • Bit_score: 110
  • Evalue 1.30e-21
Carbohydrate ABC transporter substrate-binding protein, CUT1 family {ECO:0000313|EMBL:AKI01847.1}; TaxID=1620421 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. IMCC20628.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.2
  • Coverage: 88.0
  • Bit_score: 111
  • Evalue 1.00e-21
sugar ABC transporter, extracellular solute-binding protein similarity KEGG
DB: KEGG
  • Identity: 51.5
  • Coverage: 103.0
  • Bit_score: 106
  • Evalue 5.80e-21

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Taxonomy

Hoeflea sp. IMCC20628 → Hoeflea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 336
ATGGCCAGAATGGACATCATCGCGAGAGCGGAGGGAAGGGAAGACGACGCAAGCGCATTGCCGCACGACACCCGCACCGAGATCCTCTCGACCATCGCGTTCCTGGAGGATTTCGGAGCGGAGTTCGAAAGCTCCTTCGAACTGTCGTCGCCGAACCCTTATCTCGCCATGGCCGCACACCTCATCAGAAATCACATCGAAGCGAAACCCGTCACGCAGACGTCCCTGCTCGCGGCTGCCGGCGTGCCTTACGCCACCGCCACGCGGCGCCTGAAGGAGATGTTCTCGGCCGGCTTCGTCGAGGTTCGTCCGCGCACCCGCACCGGCAAGAGCGTC
PROTEIN sequence
Length: 112
MARMDIIARAEGREDDASALPHDTRTEILSTIAFLEDFGAEFESSFELSSPNPYLAMAAHLIRNHIEAKPVTQTSLLAAAGVPYATATRRLKEMFSAGFVEVRPRTRTGKSV