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SCNpilot_expt_500_bf_scaffold_30670_1

Organism: SCNPILOT_CONT_300_BF_Mesorhizobium_65_39

partial RP 1 / 55 BSCG 2 / 51 ASCG 1 / 38
Location: comp(2..250)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Rhizobium sp. CF080 RepID=J3CWU0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 85.5
  • Coverage: 83.0
  • Bit_score: 140
  • Evalue 6.50e-31
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EUB98515.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.5
  • Coverage: 83.0
  • Bit_score: 140
  • Evalue 9.10e-31
transcriptional regulator, LysR family similarity KEGG
DB: KEGG
  • Identity: 62.7
  • Coverage: 83.0
  • Bit_score: 109
  • Evalue 3.90e-22

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Taxonomy

Rhizobium sp. CF080 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 249
ATGAATATCCGACAGCTTGAAGCGTTCCACGCCACGATCGAGACCGGATCGGTCACGCGAGCCGGCGAAAAGCTAAGGATTTCGCAGCCGGCGGTCAGCAAGCTGCTGCGTGCCTTCGCCCAGACCTGCGGCTTCCAGCTTTTCGTTCGCAGCGGTTCAAGGCTGGTCCCGACGCTCGAGGCGCGCCTGCTGGCTGTCGAGGTCGAGCGCATGTTCTCCGGCACGGAGAGGATCGCGCGGCTGGCCAAT
PROTEIN sequence
Length: 83
MNIRQLEAFHATIETGSVTRAGEKLRISQPAVSKLLRAFAQTCGFQLFVRSGSRLVPTLEARLLAVEVERMFSGTERIARLAN