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SCNpilot_expt_500_bf_scaffold_26144_2

Organism: SCNPILOT_CONT_300_BF_Alphaproteobacteria_65_35

partial RP 6 / 55 MC: 1 BSCG 6 / 51 MC: 1 ASCG 2 / 38
Location: 977..1369

Top 3 Functional Annotations

Value Algorithm Source
icdA; isocitrate dehydrogenase (EC:1.1.1.42); K00031 isocitrate dehydrogenase [EC:1.1.1.42] similarity KEGG
DB: KEGG
  • Identity: 85.5
  • Coverage: 131.0
  • Bit_score: 241
  • Evalue 1.30e-61
isocitrate dehydrogenase n=1 Tax=Nocardiopsis lucentensis RepID=UPI00034B16DE similarity UNIREF
DB: UNIREF100
  • Identity: 87.0
  • Coverage: 131.0
  • Bit_score: 244
  • Evalue 5.10e-62
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 89.3
  • Coverage: 131.0
  • Bit_score: 251
  • Evalue 7.60e-64

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Taxonomy

R_Alphaproteobacteria_66_14 → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 393
ATGGCGAAGATCAAGGTGAAGAATCCGGTCGTCGAGATGGACGGCGACGAGATGACCCGGATCATCTGGAAGTTCATCAAGGACAGGCTGATCCTTCCCTATCTCGACATCGACCTGAAATACTACGACCTCGGCATCGAATCCCGCGACAAGACCAACGACCAGGTGACGGTCGATTCGGCCAAGGCCACGCAGCAGTACGGCGTCGCCGTTAAGTGTGCGACCATCACGCCCGACGAAGCGCGCGTGAAGGAGTTCAACCTCAAGGAGATGTGGAAGTCGCCGAACGGCACGATCCGCAACATCCTCGGCGGCGTCATCTTCCGCGAGCCGATCATCTGCAAGAACGTGCCGCGCCTGGTCCCCGGCTGGACCAAGCCGATCATCATCGGC
PROTEIN sequence
Length: 131
MAKIKVKNPVVEMDGDEMTRIIWKFIKDRLILPYLDIDLKYYDLGIESRDKTNDQVTVDSAKATQQYGVAVKCATITPDEARVKEFNLKEMWKSPNGTIRNILGGVIFREPIICKNVPRLVPGWTKPIIIG