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SCNpilot_expt_500_bf_scaffold_2368_13

Organism: SCNpilot_BF_INOC_Xanthomonadales_64_24

partial RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: comp(12287..14260)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BWHPSA022 RepID=U8RDQ3_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 93.6
  • Coverage: 661.0
  • Bit_score: 1234
  • Evalue 0.0
Type VI secretion protein {ECO:0000313|EMBL:KGM52069.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.8
  • Coverage: 657.0
  • Bit_score: 1226
  • Evalue 0.0
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 92.2
  • Coverage: 657.0
  • Bit_score: 1218
  • Evalue 0.0

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Taxonomy

Lysobacter concretionis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1974
ATGACCGACGGCCGCGACGACGATTTCCGCATCCGCCCCAGTGCCCCTAAGAACCGCGGCCAGGGCTTCGTTTCCAAGGTGCTCAAGCAGGTAGGCAAGGCCAGCGGCGGCAAGTCCACGGTGCGGCGTCCTGGGACGGTTAGCGGCACCGGCCAGCGGCCCGGCTCGCGCCTGGGACGCGGCCACACGGCGGCGCGCTTCGCCGGCGCGAAACTGACGCCGCTCTCGCGTCGAGTGACCATCAAGACGCTGCTGGTCAATCAGCAGCGAGCCAGCCCGCAGTCGCTCGCCAAACACCTGCGCTACATCGAGCGCGACGGTGTGGGCCGCGATGGCGAGCCGGGCCAAGCCTACGGGCTGCAGACCGATGCTGCTGACCTTGACGCCTTCAAAGAACGCTGCGCCGACGACCGGCACCATTTCCGCTTCATCCTCTCACCCGAGGATGGCGCGGAACTCGAAGACCTGCGCACCTACACGCGGCACCTCATGGGCCGCATGGAGGCCGACCTGGGCACGGGCCTCGATTGGGTGGCCGTCAACCACTGGAACACTGACAACCCGCACACGCACATCGTCGTGCGCGGGCGCGACGACATCGGCAAGGACCTCATCATCGCGGGCGACTACATCGCCGATGGCTTCCGCCATCGCGCATCCGAGCTGGCGACAGAATGGCTGGGGCCGCGCACCGAGCTGGAGATCCAGCAGACCTTGCGGCGCGAAGTGGAACAAGAGCGGTGGACGAGCCTGGATCGCACGCTCAAGCGCGAGCTGGGCGACGATGGCCTGGTGCATGTCGAACGGCTCAACGAGCCGAGGTTGCAACGCCAGCGCCTGTTGGTGATCGGCCGTCTGCAACGCTTGCAGCGCCTGGGCCTGGCCGACGAGATGCAGCCGGGCACCTGGGCCGTCCATTCCGACGCGGAAAAGACTCTGCGCAGCCTCGGCGAGCGCGGCGACATCATCCGCACCATGCAGCGGGCCATGCGCGGCGAGCCGCGCGAGCTGGCGGTGTTCGAGCCGGGGGACGACGGCCGAACCATCCTCGGCCGCGTCGCCGCGAAGGGGCTGGCCGACGAGCTGCGTGACCGGGGTTATCTGGTCATCGACGGCGTGGACGGCAAGGGCCATTACGTCGCGCTCAGTGCCCGCGACGAGCTGGCGAACTATCCCATCGGCGCCGTGGTGGAGGTGAAGGGGTTGGCCGACGTGCGCGCGGCCGACAAGAACATTGCCGCACTGGCGAGCGATGGCCTGTACCGCACCGATCATCACCTCGCCATCGCGCAGGGTCAGGCCGTACCGAGCCGCGATCCGCAGGAAGTCGTCGCGGCCCACGTCCGCCGGCTGGAAGCTCTGCGCCGCGCTGGCATCGTAGAGCGCGTGGCCGAGGGACTATGGAAGGTGCCGGACGACCTGGCCGAACAGGGCCGCCGCTACGACGCGCAGCGCCTGGGCGGCGTGGCCGTGGAACTGAAATCGCACCTGCCCATCGAGCGGCAGGCCCGCGTGATCGGGGCCACCTGGCTTGACCAGCAGTTGATCGTCGGCGGCTCGGGCCTTGGCGGCCTGGGCTTTGGCGGGGAGGCCAAGCAGGCAATGCAGCAGCGCGCCGACTTCCTGGCCGAACAGGGGTTGGCAGAGCGGCGCGGGCAGCGCGTGATCCTCGCGCGCAACCTGCTAGGCACGCTGCGCAATCGGGAGCTGGCGCAGGCCGCCAAGGACATTGCGGCCGAAACCGGCTTGGAACATCGGCCTGCGGGTGACGGTCAGCGCGTGGCCGGCACCTACCGGCGCAACGTCATGCTCGCCAGTGGGCGTTACGCGATGCTCGATGACGGCATGGGGTTCAGCCTGGTGCCGTGGAAGCCAGTGATCGAACAGCGGTTGGGACAGCAGCTTGCCGCGACCATGCGTGGCGGTGGCGTGTCTTGGGAAGTTGGGCGACAGCGTGGGCCCGCCGTCGGCTAA
PROTEIN sequence
Length: 658
MTDGRDDDFRIRPSAPKNRGQGFVSKVLKQVGKASGGKSTVRRPGTVSGTGQRPGSRLGRGHTAARFAGAKLTPLSRRVTIKTLLVNQQRASPQSLAKHLRYIERDGVGRDGEPGQAYGLQTDAADLDAFKERCADDRHHFRFILSPEDGAELEDLRTYTRHLMGRMEADLGTGLDWVAVNHWNTDNPHTHIVVRGRDDIGKDLIIAGDYIADGFRHRASELATEWLGPRTELEIQQTLRREVEQERWTSLDRTLKRELGDDGLVHVERLNEPRLQRQRLLVIGRLQRLQRLGLADEMQPGTWAVHSDAEKTLRSLGERGDIIRTMQRAMRGEPRELAVFEPGDDGRTILGRVAAKGLADELRDRGYLVIDGVDGKGHYVALSARDELANYPIGAVVEVKGLADVRAADKNIAALASDGLYRTDHHLAIAQGQAVPSRDPQEVVAAHVRRLEALRRAGIVERVAEGLWKVPDDLAEQGRRYDAQRLGGVAVELKSHLPIERQARVIGATWLDQQLIVGGSGLGGLGFGGEAKQAMQQRADFLAEQGLAERRGQRVILARNLLGTLRNRELAQAAKDIAAETGLEHRPAGDGQRVAGTYRRNVMLASGRYAMLDDGMGFSLVPWKPVIEQRLGQQLAATMRGGGVSWEVGRQRGPAVG*