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SCNpilot_expt_500_bf_scaffold_397_21

Organism: SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8

near complete RP 50 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: comp(19845..20561)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104188};; tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_00564}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 238.0
  • Bit_score: 464
  • Evalue 8.00e-128
rph; ribonuclease PH; K00989 ribonuclease PH [EC:2.7.7.56] similarity KEGG
DB: KEGG
  • Identity: 94.1
  • Coverage: 238.0
  • Bit_score: 437
  • Evalue 2.30e-120
  • rbh
Ribonuclease PH n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WGD2_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 238.0
  • Bit_score: 464
  • Evalue 5.70e-128
  • rbh

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Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 717
ATGCGACCCTCCGGCCGCGCGCCCGACCAGATGCGCCCCATCGCCATCGAAACCGAATTCACCATCCACGCCGAAGGCAGCGTGCTGGTAAGCTTCGGCAACACCAAGGTGCTCGTCACCGCCAGCGTCGAGGAGAAGGTGCCGCCCTTCCTGCGCGGCAAGGGGCAGGGCTGGGTGACCGCCGAATATGGCATGCTGCCCCGCGCGACGCACACGCGCGGCAGCCGCGAGGCGGCGAAGGGCAAGCAGTCGGGACGGACGCAGGAAATTCAGCGGCTTATCGGGCGCAGCTTGCGCGCCGTCGTCGATATGAAGAAGCTCGGCGAGCGCCAGATCGTGATCGATTGCGACGTGATCCAGGCCGATGGCGGCACGCGCACCGCGTCGATTTCGGGCGCGTGGGTCGCGCTGCGGCTCGCGGTCGACAAGCTGATCGCGGCCAAGGCGATTGCCGAAGACCCGATCGAGGACAAGGTCGCGGCGATTTCGTGCGGCATGTATCAGGGCACCGCGGTCCTCGACCTCGATTATGACGAGGATTCGAACGCCGAAGCCGACGGCAATTTCGTGCTGACCGGCAAGGGCCAGATCGTCGAAGTGCAGGCGAGCGCCGAGGGCGCGACCTATGACGAGGAAGGCTTGCTGCGCCTCCTCCGCCTCGCGCGCATCGGCTGCGGCGAGATTTTCGCGGCGCAGGCGAAGGCGGTGGGTAGGTAG
PROTEIN sequence
Length: 239
MRPSGRAPDQMRPIAIETEFTIHAEGSVLVSFGNTKVLVTASVEEKVPPFLRGKGQGWVTAEYGMLPRATHTRGSREAAKGKQSGRTQEIQRLIGRSLRAVVDMKKLGERQIVIDCDVIQADGGTRTASISGAWVALRLAVDKLIAAKAIAEDPIEDKVAAISCGMYQGTAVLDLDYDEDSNAEADGNFVLTGKGQIVEVQASAEGATYDEEGLLRLLRLARIGCGEIFAAQAKAVGR*