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SCNpilot_expt_500_bf_scaffold_1977_13

Organism: SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8

near complete RP 50 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: comp(10704..12275)

Top 3 Functional Annotations

Value Algorithm Source
Retron-type reverse transcriptase n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5Y8Y6_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 61.5
  • Coverage: 501.0
  • Bit_score: 620
  • Evalue 1.80e-174
  • rbh
Retron-type reverse transcriptase {ECO:0000313|EMBL:EHR00966.1}; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM471.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.5
  • Coverage: 501.0
  • Bit_score: 620
  • Evalue 2.50e-174
Retron-type reverse transcriptase similarity KEGG
DB: KEGG
  • Identity: 48.4
  • Coverage: 469.0
  • Bit_score: 410
  • Evalue 8.80e-112

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Taxonomy

Bradyrhizobium sp. WSM471 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1572
ATGGCGAAGGGGGGCAGCGGATACAGTGAGCCGACAGGAGGTGGGCGGAAGCCCGGCGCGGTGAATACCGAGTTTATCCTCGACATGCAGAGCAAACTGTATCGGTGGAGTAAGGCGGCCCCGGACAAGCGGTTCGGGGACGTGTTCAATCTGGTGAGTGACCGCCGAACGCTCAATTATGCCTGGCGTCGGATGGCCCGCAACGCGGGCAGCAAGACGCCCGGCACGGATGGCGTTGGGCGGATACAGGTCGAACAGCGTAGCGGCGGGGTGGAGCGCTTCCTCGACGAGATCGAGGCGCAGCTTCGGGATGGAACCTACAGGCCACAGCCTGTCCGGCAGCGGTGGATACCGAAGCCGGGCAAGCCGGGCCGGTTCCGACCGCTGGGCATCCCTACGCTGAAAGACCGCTTGGTACAGATGGCTTTGAAGCTTGTTCTGGAGCCGATCTTCGAGGCGGACTTCTATCCGACCTCGTTCGGCTTCCGGCGTGGTCGAAGCACCCACGACGCCATCGCGACAATCCAGCGGCAGGTTAATCCCGGTCGCTGGGGCGATACGCGGGTCACCTATGTGATCGAAGGTGACATCAAGGGATGCTTCGACAACATCGACCACCACCGGCTCATGGAGCGGGTGCGCCGTCGCATTACGGATCGCAAGGTCCTGCGGCTCGTGCTCGCCTTCCTGCGGGCGGGGATCATGGTCGAGAGCACCGTCCGCCATCCTGTCGCGGGAACGCCGCAGGGTGGCATCATATCGCCATTGCTGTCGAACATCATGCTGACGGCAATCGAGGAGCGATATCGACGGTGGACGCCCGGCCCCTATGAGACGGTGACCAGTGCGACCCAGCGTCGCGCCCGCGATTACAACAGCGGGAAGGCAACCTTCTACATGGTGCGATACGCCGACGACTTCGTCGTGCTCGTATCCGGGCCGAGGGCAGCGGCAGAAGCCGAGAAAGATGCGCTGGCGACGTTCCTCCGCGAGGAACTGCGTCTTGAGCTGTCGCCCGAGAAGACCTTGATTACCGATATCCGAGAAGGCTTCGACTTCCTCGGCTATCGGATCGTGAAGAAGCGATCCACCCGAACCGGGCGGTTCGTCTGCAAGCTGCTGATCCCGTTGGACAGGTTGCAGCGTCTGCGCGACACGATCAAGGGGCGGACGAAGAGGCCGAGTCTTCGGCTCTCCTTGTCCGCGATCATCGACGACCTCAACCCGCTCATACTGGGGTGGCGAACCTATTATCGTCACGCCATGCGGGCGCGCCGCGAGTTTAGGAAACTGGACTGGTGGCTGTGGTGGCGCATCTACAAATGGCTGCGCAAAAAGCATCCGAAGACCACGCGGACGGTCAAGCGACGCTTCTTCCAAAGGGAGCCGAATGGTCCGATGCGATGGACAGAGGGCAATGCGGGCCTGCGCTGGTTCTGGGAGGGCGCAACAGCGCCCTACCCCTACCGGGGCACCAAGATCACCAACGGATGGGACACCATCGCGGAAGCGTGGACGGGCGACCGACCCACCGACTTCTGGCCGATGCTGCGGCTCAGCGCCGCCGTCTGA
PROTEIN sequence
Length: 524
MAKGGSGYSEPTGGGRKPGAVNTEFILDMQSKLYRWSKAAPDKRFGDVFNLVSDRRTLNYAWRRMARNAGSKTPGTDGVGRIQVEQRSGGVERFLDEIEAQLRDGTYRPQPVRQRWIPKPGKPGRFRPLGIPTLKDRLVQMALKLVLEPIFEADFYPTSFGFRRGRSTHDAIATIQRQVNPGRWGDTRVTYVIEGDIKGCFDNIDHHRLMERVRRRITDRKVLRLVLAFLRAGIMVESTVRHPVAGTPQGGIISPLLSNIMLTAIEERYRRWTPGPYETVTSATQRRARDYNSGKATFYMVRYADDFVVLVSGPRAAAEAEKDALATFLREELRLELSPEKTLITDIREGFDFLGYRIVKKRSTRTGRFVCKLLIPLDRLQRLRDTIKGRTKRPSLRLSLSAIIDDLNPLILGWRTYYRHAMRARREFRKLDWWLWWRIYKWLRKKHPKTTRTVKRRFFQREPNGPMRWTEGNAGLRWFWEGATAPYPYRGTKITNGWDTIAEAWTGDRPTDFWPMLRLSAAV*