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SCNpilot_expt_500_bf_scaffold_3148_2

Organism: SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8

near complete RP 50 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: comp(1151..1570)

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UWS1_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 98.6
  • Coverage: 139.0
  • Bit_score: 269
  • Evalue 2.10e-69
TetR family transcriptional regulator {ECO:0000313|EMBL:ENY82895.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.6
  • Coverage: 139.0
  • Bit_score: 269
  • Evalue 2.90e-69
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 53.4
  • Coverage: 131.0
  • Bit_score: 128
  • Evalue 1.40e-27

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Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 420
ATGGGATCGATGATCCAGGATCTGACGGGCGCGCTGGATAATGTCGTCGACCTGCTGAAAACTGACGATGCGGCGCCGCGCACGATTGCCGATCATGTTTTCGATGCCTTTGACAAGGGCGGCGCCGGGCCGCTCGCGGCGTGGATCGTTCTGTCGGGCGATGTTGGCCGCCTCGAGCCGATCCGCGATGCGGTCGGTGCGCTCGTCACCGCGATCGTCGGTCAGTCGAAGGATGCCGCCGCGCGCGAGCGCGTCCGCGCCGCAGTGCTGATGGTCGCTGTCAGCGCGTTCGGCGATGCCGTGATCGGCCCCTATCTACGCGATATGCTGGGCCAGAAGGATGATGCGATGCGCGATCTCGTCACCCGCTTCCTGCCGCTGTTCCTGTCTCCCGGCTTCCTGGGGCTGGCCGACGACTAG
PROTEIN sequence
Length: 140
MGSMIQDLTGALDNVVDLLKTDDAAPRTIADHVFDAFDKGGAGPLAAWIVLSGDVGRLEPIRDAVGALVTAIVGQSKDAAARERVRAAVLMVAVSAFGDAVIGPYLRDMLGQKDDAMRDLVTRFLPLFLSPGFLGLADD*