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SCNpilot_expt_500_bf_scaffold_5993_2

Organism: SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8

near complete RP 50 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: comp(1009..2115)

Top 3 Functional Annotations

Value Algorithm Source
Rod shape-determining protein RodA n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WCX9_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 99.7
  • Coverage: 368.0
  • Bit_score: 720
  • Evalue 6.80e-205
  • rbh
Rod shape-determining protein RodA {ECO:0000313|EMBL:ENY81603.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 368.0
  • Bit_score: 720
  • Evalue 9.50e-205
rod shape-determining protein RodA; K05837 rod shape determining protein RodA similarity KEGG
DB: KEGG
  • Identity: 86.0
  • Coverage: 321.0
  • Bit_score: 553
  • Evalue 4.50e-155
  • rbh

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Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1107
ATGATCCCGGTTCCGCCCGCCGTCCAGCGCATCCCCTGGAAGCTGATCGCGCTCCTGTCGGCGATCACCGGCTTCGGCCTGCTCGTTCTCTATTCGGCCGCTGGCGGCAGCGTGACGCCCTGGGCGCTGCAACAGGGGGTGCGCTTCATCGTCTTCCTGCTCGTCGCGCTCGCAATCGGGCGCATGCCGATCCGCATTTTCGAGGATTTCTCGTACGTCGGCTATCTGGGCGTCGCGCTTCTGCTCCTCGCGGTCGAGGCGCTCGGCTTTGTCGGCGGCGGCAGTCAGCGATGGCTCAATCTCGGCTTCATGAACCTCCAGCCGTCGGAACTGATGAAGGTCGCGATCGTCCTCGCGCTCGCGCGCTTCTACGCGCAATTGCCGCCGGGCAGCACGCGCACCTTCAACGCCCTGTGGCCCGCGCTGGTGATGATCGGCATCCCCGCGGCGCTCGTGATGCTCCAGCCCGACCTCGGCACGGCGCTGGCGATCTGCGCCAGCGCGGCGATCGTGATGTTCGTCTCCGGCCTTCCACTGTGGTGGTTCGGCAGCGCCGCGCTCGCGGGACTGGCCGCGCTGCCGATCCTGTTTTCGATGCTGCACGACTATCAGCAGAAGCGCGTCCTGATCTTCCTCGACCCCGAAAGCGATCCCCTCGGCGCCGGCTATCACATCAGCCAGTCGAAGATTGCGATCGGATCGGGCGGCATTTTCGGCAAGGGCTTCCTCAACGGATCGCAAAGCCACCTCGATTATTTGCCCGAAGGCCATACCGACTTCATCTTCGCGACTATGTCGGAGGAATGGGGGCTGGTCGGCGGGCTGCTGCTGCTGCTCGGCTTCTTCTTCCTGCTGCGCTGGTCCACCCGCGTTGCGCTCAACGCGCGGACGCGCTTCGGCCAATTGACCGCAACCGGCCTCACCATGACGATCTTTTTCTATATCGCCATCAATCTGGGCATGGTGATGGGGCTGGCGCCGGTCGTCGGTATCCCGTTGCCGCTCTTCTCCTATGGCGGATCGTCTATGCTGACGATCATGACCTGCATCGGCATCATCCTCGCGATCGAGAATGACAGCAAGAAGCGGCACAGCCGGCTGAGCTGA
PROTEIN sequence
Length: 369
MIPVPPAVQRIPWKLIALLSAITGFGLLVLYSAAGGSVTPWALQQGVRFIVFLLVALAIGRMPIRIFEDFSYVGYLGVALLLLAVEALGFVGGGSQRWLNLGFMNLQPSELMKVAIVLALARFYAQLPPGSTRTFNALWPALVMIGIPAALVMLQPDLGTALAICASAAIVMFVSGLPLWWFGSAALAGLAALPILFSMLHDYQQKRVLIFLDPESDPLGAGYHISQSKIAIGSGGIFGKGFLNGSQSHLDYLPEGHTDFIFATMSEEWGLVGGLLLLLGFFFLLRWSTRVALNARTRFGQLTATGLTMTIFFYIAINLGMVMGLAPVVGIPLPLFSYGGSSMLTIMTCIGIILAIENDSKKRHSRLS*