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SCNpilot_expt_500_bf_scaffold_339_16

Organism: scnpilot_dereplicated_Plasmid_Proteobacteria_1

RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: comp(15021..15332)

Top 3 Functional Annotations

Value Algorithm Source
conjugal transfer protein TrbD n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI0003765F3F similarity UNIREF
DB: UNIREF100
  • Identity: 49.0
  • Coverage: 98.0
  • Bit_score: 92
  • Evalue 2.60e-16
Conjugal transfer protein TrbD 1 {ECO:0000313|EMBL:AIC29729.1}; TaxID=1432050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. IE4771.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.2
  • Coverage: 86.0
  • Bit_score: 92
  • Evalue 2.70e-16
trbD; conjugal transfer protein TrbD; K03198 type IV secretion system protein VirB3 similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 90.0
  • Bit_score: 91
  • Evalue 1.40e-16

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Taxonomy

Rhizobium etli → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 312
ATGGACGAACCACGCCGTATCCCTATCCACCGGAGTCTGAACCGCCCGAACCTGTTGCTTGGCGGCGACCGCGAGCTGGTCTTGATGACCATGCTTTGCGCCGCGATGGTCGGCTTCACTGCCTCGTCGCTGCTGCAATTGGGTATCGGCGTGGTGTTGTGGCTGGCCGTGCATGCCGGCCTGGTGCAGATGGCGAAGTCCGACCCGAACATGCGCGACGTGTACGTGCGCCATGTGAAGTACCGGCCCTTCTACTCCGCGCGCACCGGGCTGGACAGCAAGCCGCTCCAAGCTCCTGAATGGAAAGACTGA
PROTEIN sequence
Length: 104
MDEPRRIPIHRSLNRPNLLLGGDRELVLMTMLCAAMVGFTASSLLQLGIGVVLWLAVHAGLVQMAKSDPNMRDVYVRHVKYRPFYSARTGLDSKPLQAPEWKD*