ggKbase home page

SCNpilot_expt_500_p_scaffold_25082_5

Organism: SCNpilot_expt_500_p_UNK

megabin RP 50 / 55 MC: 48 BSCG 50 / 51 MC: 48 ASCG 27 / 38 MC: 20
Location: comp(1924..3123)

Top 3 Functional Annotations

Value Algorithm Source
PREDICTED: E3 ubiquitin-protein ligase RNF14-like, partial n=1 Tax=Danio rerio RepID=UPI0002027815 similarity UNIREF
DB: UNIREF100
  • Identity: 30.4
  • Coverage: 329.0
  • Bit_score: 175
  • Evalue 8.80e-41
e3 ubiquitin-protein ligase RNF14-like similarity KEGG
DB: KEGG
  • Identity: 30.4
  • Coverage: 329.0
  • Bit_score: 175
  • Evalue 2.80e-41
Uncharacterized protein {ECO:0000313|Ensembl:ENSDARP00000101485}; TaxID=7955 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio.;" source="Danio rerio (Zebrafish) (Brachydanio rerio).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 29.9
  • Coverage: 311.0
  • Bit_score: 173
  • Evalue 4.70e-40

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Danio rerio → Danio → Cypriniformes → Neopterygii → Chordata → Metazoa

Sequences

DNA sequence
Length: 1200
ATGAACATCTGGGAAACAAATCCAAATCAAATAGTCTTATTTAATTGGTGGCAATATTTTTCAGAATTGGAAATATTTGAAGAATTAGCAAAGGCACCCTTTGAAGCTCAGATTGATGTTGAGAAATTAAAACGTTATTATACATTTCTTCATAATGATGACTACAAAAATATAGAAGAAGAGGAAGTGAAAGAAATAAATGAAGAAGTTGAAGAGAACGGAAAAAAAGAAGATGTAAATAGAAACAATAGACCTGTAGATCAATTAACTTTACTTTTAAATGAAATATTTTCGGATGTTTTTATTGAACTATTTGTCCCTAGTTTTGAAGAATCAATTCACACTTGTGAAATTTGTATGGATGAGTACCTTGGAACTGATATGACTATCTTAGATCCTTGTGAACATTTTTATTGTACAAGTTGTTTAACTGATTTTATTACTATCAACATTCAAGAAGGAGCTGTAAACGCAATTAAATGTCCTCATTCCGGATGTCAATTAGTCATTTCTTCTTTCATCGTTTGGCAACTTACTCCTGACCTCTATTCAAAATATGATCGGCTTCTCTTAGTTGCAGCTTTAAATACAATGCAAGACCTAACTTATTGCCCTCGCAAAGGATGTTCCCTCCCCATTGTAATCCCAAAAAATCGTAAAGAAGCAACTTGTCCCTCTTGTAATTTTCATTTTTGTTTAATTTGCTTTGGAGTATATCATGGAACCACACGTTGTCCACTTTACCTCAGCGAAAATGAACAAGAAGCGGAGAGCATTAAATATGCACAACAAGTTACTCGAAAATGTCCCAATTGCTTTACTCCAATTGAAAAAAATGGGGGTTGTAGCCATATGTATTGTACCAATTGCTATACTCATTTTGATTGGAATGATTCCATTAGTTTCGAATCACCTACTCCACCTCCAAAACCAAAATCTATTGCAATTAAAAGAACTCAACCACAACCTCGACCAAATATTCGACCCACTTTTCAACCAACTCCTCCAACAAAAAATTTAACCAAAAACTCGACCTATTCCAAACCTTGTCCAAGATGTCACTTAAGACAAGCAAAAAAAAATTCGACTTATGATCAAATGTATTGTATGAACTGTCAGGCAGGATTTTGTTTCTTTTGTGGCTCTCATCATTCAGCTACCCATTTCAGTAGAGGAATGTGTCTCTTGAGATCTTCGTGA
PROTEIN sequence
Length: 400
MNIWETNPNQIVLFNWWQYFSELEIFEELAKAPFEAQIDVEKLKRYYTFLHNDDYKNIEEEEVKEINEEVEENGKKEDVNRNNRPVDQLTLLLNEIFSDVFIELFVPSFEESIHTCEICMDEYLGTDMTILDPCEHFYCTSCLTDFITINIQEGAVNAIKCPHSGCQLVISSFIVWQLTPDLYSKYDRLLLVAALNTMQDLTYCPRKGCSLPIVIPKNRKEATCPSCNFHFCLICFGVYHGTTRCPLYLSENEQEAESIKYAQQVTRKCPNCFTPIEKNGGCSHMYCTNCYTHFDWNDSISFESPTPPPKPKSIAIKRTQPQPRPNIRPTFQPTPPTKNLTKNSTYSKPCPRCHLRQAKKNSTYDQMYCMNCQAGFCFFCGSHHSATHFSRGMCLLRSS*